RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 SLC13A5Q86YT5 568 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-224ENST00000523873 ATG4AQ8WYN0 398 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 ECHDC3Q96DC8 303 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 ZNF641Q96N77 438 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-224ENST00000523873 SMIM14Q96QK8 99 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 MYOCQ99972 504 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 BRD8Q9H0E9 1235 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 DKK3Q9UBP4 350 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 ZFR2Q9UPR6 939 aaKnown RBP12.94□□□□□ -0.34
VEGFA-224ENST00000523873 CA5BQ9Y2D0 317 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 FAM186AA6NE01 2351 aa12.94□□□□□ -0.34
VEGFA-224ENST00000523873 MYO15AQ9UKN7 3530 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 CACNA1EQ15878 2313 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.93□□□□□ -0.34
VEGFA-224ENST00000523873 A8MX80 341 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 UPK3BL1B0FP48 263 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 UPK3BL2E5RIL1 263 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 ATP1A1P05023 1023 aaKnown RBP12.93□□□□□ -0.34
VEGFA-224ENST00000523873 PDHA1P08559 390 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 RBP3P10745 1247 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 PRLRP16471 622 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 XPAP23025 273 aaPredicted RBP12.93□□□□□ -0.34
VEGFA-224ENST00000523873 CD68P34810 354 aaPredicted RBP12.93□□□□□ -0.34
VEGFA-224ENST00000523873 CD86P42081 329 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 MAPK8P45983 427 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 CCR5P51681 352 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 XRCC4Q13426 336 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 TEX44Q53QW1 395 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 WDR45BQ5MNZ6 344 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 PLA2G2CQ5R387 149 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 SYCP2LQ5T4T6 812 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 ALG1LQ6GMV1 187 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 DARS2Q6PI48 645 aaKnown RBP12.93□□□□□ -0.34
VEGFA-224ENST00000523873 SYT12Q8IV01 421 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 ZNF567Q8N184 647 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 HTR3CQ8WXA8 447 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 DNASE2BQ8WZ79 361 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 SLC6A18Q96N87 628 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 RBM15Q96T37 977 aaKnown RBP eCLIP12.93□□□□□ -0.349e-9■■■□□ 15.3
VEGFA-224ENST00000523873 WRAP53Q9BUR4 548 aaKnown RBP12.93□□□□□ -0.34
VEGFA-224ENST00000523873 PCED1AQ9H1Q7 454 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 CARD9Q9H257 536 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 PREBQ9HCU5 417 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 FZD3Q9NPG1 666 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 PCDH12Q9NPG4 1184 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 SEMA4GQ9NTN9 838 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 KLHL8Q9P2G9 620 aaPredicted RBP12.93□□□□□ -0.34
VEGFA-224ENST00000523873 PCDHB9Q9Y5E1 797 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 PCDHGA5Q9Y5G8 931 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 RAI2Q9Y5P3 530 aa12.93□□□□□ -0.34
VEGFA-224ENST00000523873 VPS13AQ96RL7 3174 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 A0A0U1RQS6 177 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 A0A1W2PPC4 97 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 GOLGA6L9A6NEM1 432 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 HACD1B0YJ81 288 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 NEMP1O14524 444 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 AREL1O15033 823 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 SLC31A1O15431 190 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 KCNN4O15554 427 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 HTRA2O43464 458 aaPredicted RBP12.92□□□□□ -0.34
VEGFA-224ENST00000523873 KIF5CO60282 957 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 CEP104O60308 925 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 MMP20O60882 483 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 SOCS5O75159 536 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 PGLSO95336 258 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 CPP00450 1065 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 CFIP05156 583 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 DMDP11532 3685 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 CTPS1P17812 591 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 NFKB1P19838 968 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 CD27P26842 260 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 FAM193AP78312 1265 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 SKOR1P84550 965 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 CCDC15Q0P6D6 951 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 RALGDSQ12967 914 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 FGL2Q14314 439 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 UGP2Q16851 508 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 ZNF284Q2VY69 593 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 TRIM61Q5EBN2 209 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 PEAR1Q5VY43 1037 aaPredicted RBP12.92□□□□□ -0.34
VEGFA-224ENST00000523873 BRAT1Q6PJG6 821 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 KDM7AQ6ZMT4 941 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 TRIM69Q86WT6 500 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 HORMAD1Q86X24 394 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 CDKL3Q8IVW4 592 aaPredicted RBP12.92□□□□□ -0.34
VEGFA-224ENST00000523873 KIAA2013Q8IYS2 634 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 SPATA22Q8NHS9 363 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 C1orf54Q8WWF1 131 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 TEKT5Q96M29 485 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 KDM4CQ9H3R0 1056 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 GLOD4Q9HC38 313 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 RXFP3Q9NSD7 469 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 SMARCAL1Q9NZC9 954 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 UBP1Q9NZI7 540 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 AMACRQ9UHK6 382 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 DNPEPQ9ULA0 475 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 CHKBQ9Y259 395 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 COQ6Q9Y2Z9 468 aa12.92□□□□□ -0.34
VEGFA-224ENST00000523873 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.92□□□□□ -0.34
VEGFA-224ENST00000523873 IGLON5A6NGN9 336 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms