RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 TMPRSS4Q9NRS4 437 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 PLK2Q9NYY3 685 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 STMN3Q9NZ72 180 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 ERVK-21P61565 698 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 TRIM16LQ309B1 348 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 ATP13A4Q4VNC1 1196 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 XKR6Q5GH73 641 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 CNSTQ6PJW8 725 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 SH3BP5LQ7L8J4 393 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 PIWIL4Q7Z3Z4 852 aaKnown RBP16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 SLC41A1Q8IVJ1 513 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 ZNF75CPQ92670 426 aaPredicted RBP16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 MTFMTQ96DP5 389 aaKnown RBP16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 CLIP3Q96DZ5 547 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 PCYOX1Q9UHG3 505 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 GPN3Q9UHW5 284 aaPredicted RBP16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 PIPSLA2A3N6 862 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 CILPO75339 1184 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 EPHX1P07099 455 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 PIRTP0C851 137 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 ME2P23368 584 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 ARL2P36404 184 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 SLC5A3P53794 718 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 IZUMO2Q6UXV1 221 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 ZDHHC4Q9NPG8 344 aa16.35■□□□□ 0.21
PCDHA3-201ENST00000522353 H3BQF6 201 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 KCNH1O95259 989 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 OR4Q2P0C623 313 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 RAB10P61026 200 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 FOXR1Q6PIV2 292 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 C16orf62Q7Z3J2 963 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 SCAIQ8N9R8 606 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 SETD9Q8NE22 299 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 C2orf15Q8WU43 125 aaKnown RBP16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 ASZ1Q8WWH4 475 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 TCF25Q9BQ70 676 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 LRRC19Q9H756 370 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 KCND1Q9NSA2 647 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 ADGRB2O60241 1585 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 AGRPO00253 132 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 RHOQP17081 205 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 MC4RP32245 332 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 CRADDP78560 199 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 CBX2Q14781 532 aaPredicted RBP16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 WDR36Q8NI36 951 aaKnown RBP16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 EBNA1BP2Q99848 306 aaKnown RBP16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 APOL4Q9BPW4 351 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 MRPL57Q9BQC6 102 aaKnown RBP16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 NEK6Q9HC98 313 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 LRRC72A6NJI9 287 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 CLPTM1O96005 669 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 FEN1P39748 380 aaKnown RBP16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 ABCG1P45844 678 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 GALNT3Q14435 633 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 CHST9Q7L1S5 443 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 DBF4BQ8NFT6 615 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 ARNTL2Q8WYA1 636 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 RMND5BQ96G75 393 aaPredicted RBP16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 TTLL2Q9BWV7 592 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 CEP78Q5JTW2 689 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 RASAL3Q86YV0 1011 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 IFNL1Q8IU54 200 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 EPHX4Q8IUS5 362 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 CFAP52Q8N1V2 620 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 CD101Q93033 1021 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 RNFT2Q96EX2 444 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 GLOD4Q9HC38 313 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 SAR1AQ9NR31 198 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 PTPRJQ12913 1337 aa16.34■□□□□ 0.21
PCDHA3-201ENST00000522353 SLC28A1O00337 649 aa16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 CRTC3Q6UUV7 619 aa16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 R3HCC1LQ7Z5L2 792 aaKnown RBP16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 SNX32Q86XE0 403 aa16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 ITFG1Q8TB96 612 aa16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 HDAC10Q969S8 669 aa16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 ST6GALNAC4Q9H4F1 302 aa16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 IMP3Q9NV31 184 aaKnown RBP16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 SLIT3O75094 1523 aa16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 RNASEH2AO75792 299 aaKnown RBP16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 IDSP22304 550 aa16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 FAM151BQ6UXP7 276 aa16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 CLP1Q92989 425 aaKnown RBP16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 RNF145Q96MT1 663 aa16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 PCDH18Q9HCL0 1135 aa16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 GULP1Q9UBP9 304 aa16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 HBS1LQ9Y450 684 aaKnown RBP16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 ACTL7BQ9Y614 415 aa16.33■□□□□ 0.21
PCDHA3-201ENST00000522353 MRC1P22897 1456 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 SOWAHBA6NEL2 793 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 C5orf60A6NFR6 353 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 CHURC1-FNTBB4DL54 471 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 HMGB3O15347 200 aaKnown RBP16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 KRT75O95678 551 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 TACR2P21452 398 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 CRATP43155 626 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 IFI35P80217 286 aaPredicted RBP16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 IL17AQ16552 155 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 ARSHQ5FYA8 562 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 ZCCHC23Q6ZST2 131 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms