RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 DENND5AQ6IQ26 1287 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 TXNDC11Q6PKC3 985 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 RNF135Q8IUD6 432 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 CCNJLQ8IV13 435 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 DNAAF3Q8N9W5 541 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 OR2A12Q8NGT7 310 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 LRIG1Q96JA1 1093 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 NSMCE3Q96MG7 304 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 PHOX2BQ99453 314 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 WDR83Q9BRX9 315 aaKnown RBP13.18□□□□□ -0.3
CPNE3-205ENST00000522240 NAT9Q9BTE0 207 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 IL22Q9GZX6 179 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 TMEM245Q9H330 911 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 CDC42EP4Q9H3Q1 356 aaKnown RBP13.18□□□□□ -0.3
CPNE3-205ENST00000522240 BFARQ9NZS9 450 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 EVLQ9UI08 416 aaPredicted RBP13.18□□□□□ -0.3
CPNE3-205ENST00000522240 RPL26L1Q9UNX3 145 aaKnown RBP13.18□□□□□ -0.3
CPNE3-205ENST00000522240 SORCS3Q9UPU3 1222 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 RAI2Q9Y5P3 530 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 TEX264Q9Y6I9 313 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 C5orf42Q9H799 3197 aa13.18□□□□□ -0.3
CPNE3-205ENST00000522240 TTC24A2A3L6 582 aaPredicted RBP13.17□□□□□ -0.3
CPNE3-205ENST00000522240 TTC34A8MYJ7 566 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 FZD6O60353 706 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 SPAG6O75602 509 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 POP4O95707 220 aaKnown RBP13.17□□□□□ -0.3
CPNE3-205ENST00000522240 CPP00450 1065 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 AGTP01019 485 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 ABHD2P08910 425 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 GRIA4P48058 902 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 OLIG2Q13516 323 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 FASTKD3Q14CZ7 662 aaKnown RBP13.17□□□□□ -0.3
CPNE3-205ENST00000522240 MYLK3Q32MK0 819 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 ARMC12Q5T9G4 340 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 EGFLAMQ63HQ2 1017 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 SERPINA13PQ6UXR4 307 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 DPY19L3Q6ZPD9 716 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 SFTPA1Q8IWL2 248 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 ZBED8Q8IZ13 594 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 SIGLEC10Q96LC7 697 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 ZNF641Q96N77 438 aaPredicted RBP13.17□□□□□ -0.3
CPNE3-205ENST00000522240 APOL2Q9BQE5 337 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 HEPHQ9BQS7 1158 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 OSBPL1AQ9BXW6 950 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 ADGRE3Q9BY15 652 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 PABPC3Q9H361 631 aaKnown RBP13.17□□□□□ -0.3
CPNE3-205ENST00000522240 C11orf16Q9NQ32 467 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 NINJ2Q9NZG7 142 aa13.17□□□□□ -0.3
CPNE3-205ENST00000522240 HECAQ9UBI9 543 aaPredicted RBP13.17□□□□□ -0.3
CPNE3-205ENST00000522240 SDR42E2A6NKP2 422 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 K7EQS6 105 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 MAN2B1O00754 1011 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 TRAFD1O14545 582 aaPredicted RBP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 AVILO75366 819 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 PGLSO95336 258 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 TTC4O95801 387 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 PRLP01236 227 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 GSTA2P09210 222 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 ALADP13716 330 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 MGAT1P26572 445 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 ELK3P41970 407 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 IL12RB1P42701 662 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 KIR2DL1P43626 348 aaPredicted RBP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 CHRNA4P43681 627 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 SESN2P58004 480 aaPredicted RBP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 GRSF1Q12849 480 aaKnown RBP eCLIP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 ELAVL3Q14576 367 aaKnown RBP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 PON2Q15165 354 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 MLF2Q15773 248 aaPredicted RBP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 UAP1Q16222 522 aaPredicted RBP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 FBXO43Q4G163 708 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 SIRPB2Q5JXA9 342 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 FSTL4Q6MZW2 842 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 TPRG1Q6ZUI0 275 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 TRMT11Q7Z4G4 463 aaKnown RBP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 GJD3Q8N144 294 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 AGGF1Q8N302 714 aaeCLIP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 RYBPQ8N488 228 aaPredicted RBP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 ZNF513Q8N8E2 541 aaPredicted RBP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 FBXO36Q8NEA4 188 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 OR6K2Q8NGY2 324 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 PYROXD1Q8WU10 500 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 OR8D1Q8WZ84 308 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 EZH1Q92800 747 aaPredicted RBP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 PTPRN2Q92932 1015 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 VOPP1Q96AW1 172 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 ECHDC3Q96DC8 303 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 STAMBPL1Q96FJ0 436 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 RANBP9Q96S59 729 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 EBNA1BP2Q99848 306 aaKnown RBP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 ZDHHC6Q9H6R6 413 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 MRM3Q9HC36 420 aaKnown RBP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 FBRSL1Q9HCM7 1045 aaKnown RBP13.16□□□□□ -0.3
CPNE3-205ENST00000522240 SYBUQ9NX95 663 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 SAMD15Q9P1V8 674 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 SUN2Q9UH99 717 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 HCN2Q9UL51 889 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 CHMP2BQ9UQN3 213 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 CHKBQ9Y259 395 aa13.16□□□□□ -0.3
CPNE3-205ENST00000522240 MYLKQ15746 1914 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms