RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 ACOX2Q99424 681 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 HEPHQ9BQS7 1158 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 CPEB1Q9BZB8 566 aaKnown RBP21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 IL22Q9GZX6 179 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 TMEM245Q9H330 911 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 VPS37BQ9H9H4 285 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 ZNF446Q9NWS9 450 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 CACNA2D2Q9NY47 1150 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 ZC3H7BQ9UGR2 993 aaKnown RBP21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 PCDHB9Q9Y5E1 797 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 EDDM13A0A1B0GTR0 161 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 WASH3PC4AMC7 463 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 EGFP01133 1207 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 PRLP01236 227 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 FGF1P05230 155 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 IL12RB1P42701 662 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 POU6F1Q14863 301 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 E2F5Q15329 346 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 HNRNPA1L2Q32P51 320 aaKnown RBP21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 TMEM196Q5HYL7 178 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 SPDYCQ5MJ68 293 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 FSTL4Q6MZW2 842 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 ZNF513Q8N8E2 541 aaPredicted RBP21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 UHMK1Q8TAS1 419 aaKnown RBP21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 GRIN3AQ8TCU5 1115 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 EZH1Q92800 747 aaPredicted RBP21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 FUT8Q9BYC5 575 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 LRRC4CQ9HCJ2 640 aa21.55■■□□□ 1.04
R3HCC1-208ENST00000522012 SPTBN5Q9NRC6 3674 aaKnown RBP21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 TRAFD1O14545 582 aaPredicted RBP21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 SOCS5O75159 536 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 PGLSO95336 258 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 HNRNPLP14866 589 aaKnown RBP eCLIP21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 DRD1P21728 446 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 PRKCHP24723 683 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 TIE1P35590 1138 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 EPHB1P54762 984 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 SLC29A2Q14542 456 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 GRM3Q14832 879 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 CFAP58Q5T655 872 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 TPRG1Q6ZUI0 275 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 CHPFQ8IZ52 775 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 EPB41L4BQ9H329 900 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 SUV39H2Q9H5I1 410 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 SUN2Q9UH99 717 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 IL36AQ9UHA7 158 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 DUSP12Q9UNI6 340 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 STON1Q9Y6Q2 735 aa21.54■■□□□ 1.04
R3HCC1-208ENST00000522012 HTRA2O43464 458 aaPredicted RBP21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 FZD6O60353 706 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 UGT2B4P06133 528 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 EPHX1P07099 455 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 ALADP13716 330 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 SSTR1P30872 391 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 WASP42768 502 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 KIR2DL1P43626 348 aaPredicted RBP21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 SEPT6Q14141 434 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 ARSIQ5FYB1 569 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 PCID2Q5JVF3 399 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 C9orf64Q5T6V5 341 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 GDPD4Q6W3E5 623 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 C3orf62Q6ZUJ4 267 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 STK40Q8N2I9 435 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 FAM3CQ92520 227 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 MSANTD3Q96H12 275 aa21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 ZNF641Q96N77 438 aaPredicted RBP21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 TRIM56Q9BRZ2 755 aaKnown RBP21.53■■□□□ 1.04
R3HCC1-208ENST00000522012 MAGEB16A2A368 324 aa21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 SIN3BO75182 1162 aa21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 PIRTP0C851 137 aa21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 PGAM1P18669 254 aa21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 SLC8A1P32418 973 aa21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 GPX6P59796 221 aa21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 C2orf27AQ580R0 203 aa21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 CCNJLQ8IV13 435 aa21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 PPHLN1Q8NEY8 458 aaKnown RBP21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 BLOC1S5Q8TDH9 187 aa21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 ATXN2LQ8WWM7 1075 aaKnown RBP21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 VOPP1Q96AW1 172 aa21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 NAT9Q9BTE0 207 aa21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 CHRAC1Q9NRG0 131 aa21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 WASF2Q9Y6W5 498 aa21.52■■□□□ 1.04
R3HCC1-208ENST00000522012 TICRRQ7Z2Z1 1910 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 ANKRD66B4E2M5 251 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 NPC1O15118 1278 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 LEFTY1O75610 366 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 QPCTQ16769 361 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 CES3Q6UWW8 571 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 UNC5AQ6ZN44 842 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 OR8D1Q8WZ84 308 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 ZBTB9Q96C00 473 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 ERLEC1Q96DZ1 483 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 KLHL32Q96NJ5 620 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 SOX13Q9UN79 622 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 SORCS3Q9UPU3 1222 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 PLAAQ9Y263 795 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 KIAA1549LQ6ZVL6 1849 aa21.51■■□□□ 1.03
R3HCC1-208ENST00000522012 MYO18AQ92614 2054 aaKnown RBP21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 CCDC78A2IDD5 438 aa21.5■■□□□ 1.03
R3HCC1-208ENST00000522012 PRKCGP05129 697 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms