RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 IL1BP01584 269 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 DNTTP04053 509 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 PRNPP04156 253 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 ATP1A1P05023 1023 aaKnown RBP18.35■□□□□ 0.53
VEGFA-222ENST00000520948 GKP32189 559 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 DRD3P35462 400 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 HSPA9P38646 679 aaKnown RBP18.35■□□□□ 0.53
VEGFA-222ENST00000520948 MMP13P45452 471 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 IFI35P80217 286 aaPredicted RBP18.35■□□□□ 0.53
VEGFA-222ENST00000520948 SEL1L2Q5TEA6 688 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 ALG1LQ6GMV1 187 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 USP30Q70CQ3 517 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 B4GALNT4Q76KP1 1039 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 SRLQ86TD4 932 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 FAM124AQ86V42 546 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 SLC13A5Q86YT5 568 aaPredicted RBP18.35■□□□□ 0.53
VEGFA-222ENST00000520948 AADATQ8N5Z0 425 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 CNTD1Q8N815 330 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 NSMCE1Q8WV22 266 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 HAUS1Q96CS2 278 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 MGME1Q9BQP7 344 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 CINPQ9BW66 212 aaPredicted RBP18.35■□□□□ 0.53
VEGFA-222ENST00000520948 ATP8A1Q9Y2Q0 1164 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 PKD1L2Q7Z442 2459 aa18.35■□□□□ 0.53
VEGFA-222ENST00000520948 FAM221BA6H8Z2 402 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 KCNK1O00180 336 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 TAF4O00268 1085 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 ACADMP11310 421 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 MSNP26038 577 aaKnown RBP18.34■□□□□ 0.53
VEGFA-222ENST00000520948 PSMD8P48556 350 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 AP1B1Q10567 949 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 FAM46CQ5VWP2 391 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 ZC3H18Q86VM9 953 aaKnown RBP18.34■□□□□ 0.53
VEGFA-222ENST00000520948 C17orf53Q8N3J3 647 aaPredicted RBP18.34■□□□□ 0.53
VEGFA-222ENST00000520948 RASGEF1CQ8N431 466 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 TTC13Q8NBP0 860 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 CADM4Q8NFZ8 388 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 OR6K2Q8NGY2 324 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 SETD7Q8WTS6 366 aaKnown RBP18.34■□□□□ 0.53
VEGFA-222ENST00000520948 TFB1MQ8WVM0 346 aaKnown RBP18.34■□□□□ 0.53
VEGFA-222ENST00000520948 ARRDC3Q96B67 414 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 EXOC2Q96KP1 924 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 NUDCD1Q96RS6 583 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 WDR24Q96S15 920 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 ZDHHC5Q9C0B5 715 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 GAREM1Q9H706 876 aa18.34■□□□□ 0.53
VEGFA-222ENST00000520948 RBM22Q9NW64 420 aaKnown RBP eCLIP18.34■□□□□ 0.534e-11■■■■□ 26.1
VEGFA-222ENST00000520948 EIF2B4Q9UI10 523 aaKnown RBP18.34■□□□□ 0.53
VEGFA-222ENST00000520948 PLXNB3Q9ULL4 1909 aa18.33■□□□□ 0.53
VEGFA-222ENST00000520948 TMEM131Q92545 1883 aa18.33■□□□□ 0.53
VEGFA-222ENST00000520948 C10orf142B7Z368 130 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 C1QTNF3-AMACRE9PGA6 284 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 KRIT1O00522 736 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 BCAT2O15382 392 aaPredicted RBP18.33■□□□□ 0.52
VEGFA-222ENST00000520948 JCHAINP01591 159 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 OXTRP30559 389 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 CXCR5P32302 372 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 BNC1Q01954 994 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 RAD51Q06609 339 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 ZBTB17Q13105 803 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 ZNF235Q14590 738 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 GRM3Q14832 879 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 SIX1Q15475 284 aaPredicted RBP18.33■□□□□ 0.52
VEGFA-222ENST00000520948 SLC45A4Q5BKX6 768 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 RALGPS1Q5JS13 557 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 NCEH1Q6PIU2 408 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 BBS5Q8N3I7 341 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 ADAMTS14Q8WXS8 1223 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 SNX19Q92543 992 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 PBKQ96KB5 322 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 QKIQ96PU8 341 aaKnown RBP eCLIP18.33■□□□□ 0.52
VEGFA-222ENST00000520948 TUBGCP5Q96RT8 1024 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 NEUROG2Q9H2A3 272 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 ZDHHC6Q9H6R6 413 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 NT5MQ9NPB1 228 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 SERGEFQ9UGK8 458 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 FNDC3AQ9Y2H6 1198 aaKnown RBP18.33■□□□□ 0.52
VEGFA-222ENST00000520948 R3HDM2Q9Y2K5 976 aaKnown RBP18.33■□□□□ 0.52
VEGFA-222ENST00000520948 SLCO1B1Q9Y6L6 691 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 ZFYVE26Q68DK2 2539 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 PTPRBP23467 1997 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 DMXL2Q8TDJ6 3036 aa18.33■□□□□ 0.52
VEGFA-222ENST00000520948 METTL12A8MUP2 240 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 HLA-DQB2P05538 268 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 RBP3P10745 1247 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 SCNN1BP51168 640 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 EIF3EP60228 445 aaKnown RBP18.32■□□□□ 0.52
VEGFA-222ENST00000520948 GNG11P61952 73 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 WASHC5Q12768 1159 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 SFSWAPQ12872 951 aaKnown RBP18.32■□□□□ 0.52
VEGFA-222ENST00000520948 IHHQ14623 411 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 TTC31Q49AM3 519 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-222ENST00000520948 TEX44Q53QW1 395 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 CCDC181Q5TID7 509 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 GDPD4Q6W3E5 623 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 SLCO6A1Q86UG4 719 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 PROSER1Q86XN7 944 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 RYBPQ8N488 228 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-222ENST00000520948 SLC35B2Q8TB61 432 aa18.32■□□□□ 0.52
VEGFA-222ENST00000520948 ARRDC2Q8TBH0 407 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms