RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 PCDHGC4Q9Y5F7 938 aa10.24□□□□□ -0.77
MCF2-209ENST00000520602 DOCK3Q8IZD9 2030 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 A0A087X1B8 175 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 A0A1W2PQ45 241 aaPredicted RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 A0A1W2PQY0 241 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 VPS26AO75436 327 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 TRIM16O95361 564 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 HAPLN1P10915 354 aaPredicted RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 SLC11A1P49279 550 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 CLCN5P51795 746 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 POU4F1Q01851 419 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 KRT72Q14CN4 511 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 MAPRE2Q15555 327 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 TRIP4Q15650 581 aaPredicted RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 SGO1Q5FBB7 561 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 RALGPS1Q5JS13 557 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 GPR158Q5T848 1215 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 CAPRIN2Q6IMN6 1127 aaKnown RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 FAM171BQ6P995 826 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 IZUMO2Q6UXV1 221 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 SCD5Q86SK9 330 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 PCDH20Q8N6Y1 951 aaKnown RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 FBXO22Q8NEZ5 403 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 CDC26Q8NHZ8 85 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 HEXDCQ8WVB3 486 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 DNAJC1Q96KC8 554 aaKnown RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 CXorf56Q9H5V9 222 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 NKX1-2Q9UD57 310 aaPredicted RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 AURKCQ9UQB9 309 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 KCTD3Q9Y597 815 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 ARVCFO00192 962 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 KLF11O14901 512 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 CD3EAPO15446 510 aaKnown RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 LRG1P02750 347 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 CYBBP04839 570 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 HSPA8P11142 646 aaKnown RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 HDCP19113 662 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 CORO1AP31146 461 aaKnown RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 MAGEA6P43360 314 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 PTPRCAPQ14761 206 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 MS4A13Q5J8X5 152 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 TSTD2Q5T7W7 516 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 HECTD2Q5U5R9 776 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 MBLAC2Q68D91 279 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 RNF19BQ6ZMZ0 732 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 TIFABQ6ZNK6 161 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 SETD3Q86TU7 594 aaPredicted RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 TMEM135Q86UB9 458 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 TREML1Q86YW5 311 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 ICA1LQ8NDH6 482 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 TAS2R13Q9NYV9 303 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 ZFP37Q9Y6Q3 630 aaPredicted RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 ZCCHC18P0CG32 403 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 MYL4P12829 197 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 TPD52P55327 224 aaPredicted RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 PTPRNQ16849 979 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 CLLU1OSQ5K130 101 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 PM20D1Q6GTS8 502 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 PTGR2Q8N8N7 351 aaPredicted RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 SLC7A6OSQ96CW6 309 aaPredicted RBP10.23□□□□□ -0.77
MCF2-209ENST00000520602 HCSTQ9UBK5 93 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 VTI1BQ9UEU0 232 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 PRKAG2Q9UGJ0 569 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 SORCS3Q9UPU3 1222 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 SCML2Q9UQR0 700 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 PCDHB12Q9Y5F1 795 aa10.23□□□□□ -0.77
MCF2-209ENST00000520602 BTN3A1O00481 513 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 FGF3P11487 239 aaPredicted RBP10.22□□□□□ -0.77
MCF2-209ENST00000520602 WEE1P30291 646 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 NDST2P52849 883 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 GNA12Q03113 381 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 NIPAL4Q0D2K0 466 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 KLF10Q13118 480 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 STX5Q13190 355 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 RBBP5Q15291 538 aaKnown RBP10.22□□□□□ -0.77
MCF2-209ENST00000520602 RBM20Q5T481 1227 aaKnown RBP10.22□□□□□ -0.77
MCF2-209ENST00000520602 PIWIL4Q7Z3Z4 852 aaKnown RBP10.22□□□□□ -0.77
MCF2-209ENST00000520602 OR4K2Q8NGD2 314 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 LENG8Q96PV6 779 aaPredicted RBP10.22□□□□□ -0.77
MCF2-209ENST00000520602 CDK5RAP1Q96SZ6 601 aaKnown RBP10.22□□□□□ -0.77
MCF2-209ENST00000520602 SYTL2Q9HCH5 934 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 SEMA4BQ9NPR2 832 aaPredicted RBP10.22□□□□□ -0.77
MCF2-209ENST00000520602 CRLS1Q9UJA2 301 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 AGO1Q9UL18 857 aaKnown RBP10.22□□□□□ -0.77
MCF2-209ENST00000520602 PCDHB9Q9Y5E1 797 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 TLL2Q9Y6L7 1015 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 SLC38A8A6NNN8 435 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 TMEM114B3SHH9 223 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 ACSL4O60488 711 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 MAFKO60675 156 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 TBL1XO60907 577 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 ADAMTS4O75173 837 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 DHRS4L1P0CG22 281 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 CTPS1P17812 591 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 SLC9B1Q4ZJI4 515 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 ACSBG2Q5FVE4 666 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 SWT1Q5T5J6 900 aaKnown RBP10.22□□□□□ -0.77
MCF2-209ENST00000520602 PIK3R6Q5UE93 754 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 TMEM198Q66K66 360 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 STEAP4Q687X5 459 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms