RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 DPCR1Q3MIW9 517 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 MIIPQ5JXC2 388 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 GLRA4Q5JXX5 417 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 Q6ZPA2 131 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 RRM2BQ7LG56 351 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 SLC46A3Q7Z3Q1 461 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 ARHGEF25Q86VW2 580 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 ANKRD13BQ86YJ7 626 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 SYCP3Q8IZU3 236 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 SIX6OS1Q8N1H7 587 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 SPATA20Q8TB22 786 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 RAB40AQ8WXH6 277 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 KCNJ9Q92806 393 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 FAM149B1Q96BN6 582 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 FAR2Q96K12 515 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 C16orf45Q96MC5 204 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 MAP7D2Q96T17 732 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 ANP32EQ9BTT0 268 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 TUBB2BQ9BVA1 445 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 STRA6Q9BX79 667 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 TEX13BQ9BXU2 312 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 RRP7BPQ9NSQ0 103 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 FOXJ2Q9P0K8 574 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 SEMA5BQ9P283 1151 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 SEC63Q9UGP8 760 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 ADAMTS5Q9UNA0 930 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 TRIM17Q9Y577 477 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 PCDHGA5Q9Y5G8 931 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 PCDHGA1Q9Y5H4 931 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 COPG1Q9Y678 874 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 SYNRGQ9UMZ2 1314 aa5.88□□□□□ -1.47
CTNNA1-202ENST00000517533 CYP3A7-CYP3A51PA0A087WV96 503 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 A0A1W2PRV1 198 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 RGSL1A5PLK6 1076 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 FAM90A8PA6NJQ4 464 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 NPIPB13A6NJU9 1138 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 NPIPB5A8MRT5 1133 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 NPIPB4C9JG80 1138 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 QSOX1O00391 747 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 MGST3O14880 152 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 ZNF263O14978 683 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 PAPSS1O43252 624 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 SPRY1O43609 319 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 TMPRSS11DO60235 418 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 RECQL5O94762 991 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 FAM90A13PP0C7W8 464 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 FAM90A24PP0C7X0 464 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 EBLN1P0CF75 366 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 IGFBP2P18065 325 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 TFEBP19484 476 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 SFPQP23246 707 aaKnown RBP eCLIP5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 CYP3A7P24462 503 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 PLA2G5P39877 138 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 PIP4K2AP48426 406 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 JAK3P52333 1124 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 STARD6P59095 220 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 CYP4F2P78329 520 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 CCDC15Q0P6D6 951 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 RUNX2Q13950 521 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 TRIM29Q14134 588 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 RCN2Q14257 317 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 MEP1BQ16820 701 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 HYAL4Q2M3T9 481 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 LETM2Q2VYF4 491 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 COLEC12Q5KU26 742 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 RBPMS2Q6ZRY4 209 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 AACSQ86V21 672 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 RHPN2Q8IUC4 686 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 TICAM1Q8IUC6 712 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 MINDY1Q8N5J2 469 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 C12orf76Q8N812 135 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 EXD3Q8N9H8 876 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 BEND2Q8NDZ0 799 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 ZFAND2BQ8WV99 257 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 ZNF606Q8WXB4 792 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 LINC00615Q96LM1 132 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 PRAM1Q96QH2 718 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 MMS19Q96T76 1030 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 GAD1Q99259 594 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 C1orf21Q9H246 121 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 MMRN2Q9H8L6 949 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 SLC22A11Q9NSA0 550 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 MTMR4Q9NYA4 1195 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 IL1RAPL1Q9NZN1 696 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 KLQ9UEF7 1012 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 FETUBQ9UGM5 382 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 RAPGEFL1Q9UHV5 662 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 OSGIN1Q9UJX0 560 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 FZD4Q9ULV1 537 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 LIPT1Q9Y234 373 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 B3GNT3Q9Y2A9 372 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 KCNK7Q9Y2U2 307 aa5.87□□□□□ -1.47
CTNNA1-202ENST00000517533 LRRD1A4D1F6 860 aa5.86□□□□□ -1.47
CTNNA1-202ENST00000517533 K7EPI3 171 aa5.86□□□□□ -1.47
CTNNA1-202ENST00000517533 PRYO14603 147 aa5.86□□□□□ -1.47
CTNNA1-202ENST00000517533 STX6O43752 255 aa5.86□□□□□ -1.47
CTNNA1-202ENST00000517533 SMPD2O60906 423 aa5.86□□□□□ -1.47
CTNNA1-202ENST00000517533 PNPP00491 289 aa5.86□□□□□ -1.47
CTNNA1-202ENST00000517533 PENKP01210 267 aaPredicted RBP5.86□□□□□ -1.47
CTNNA1-202ENST00000517533 GALTP07902 379 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms