RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ZNF586Q9NXT0 402 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 VPS51Q9UID3 782 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 TRPC5Q9UL62 973 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 KCNJ14Q9UNX9 436 aa-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP-0.8□□□□□ -2.54
RNU6-539P-201ENST00000516665 IGLV5-45A0A087WSX0 123 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 A0A087WW49 117 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 TMEM233B4DJY2 109 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 KCNJ18B7U540 433 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 J3QKU1 62 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 KLF11O14901 512 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 RRP9O43818 475 aaKnown RBP-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 RFPL2O75678 378 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 HPRP00739 348 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 ARP10275 920 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 MST1P26927 711 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 CHRNA5P30532 468 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 PBX1P40424 430 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 MAPK9P45984 424 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 ID4P47928 161 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 SLC37A1P57057 533 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 TMPRSS15P98073 1019 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 ZNF33BQ06732 778 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 LY6DQ14210 128 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 ATP13A5Q4VNC0 1218 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 ARL13AQ5H913 290 aaPredicted RBP-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 ZDHHC24Q6UX98 284 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 ANO5Q75V66 913 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 MDGA2Q7Z553 956 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 PATL1Q86TB9 770 aaKnown RBP-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 TTC7BQ86TV6 843 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 ADGRF3Q8IZF5 1079 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 C17orf53Q8N3J3 647 aaPredicted RBP-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 Q8NBF4 154 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 OR52L2PQ8NGH6 319 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 OR2W6PQ8NHA6 318 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 RHOXF1Q8NHV9 184 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 U2AF1L4Q8WU68 220 aaKnown RBP-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 ARHGEF26Q96DR7 871 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 PDLIM5Q96HC4 596 aaKnown RBP-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 ADAD1Q96M93 576 aaKnown RBP-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 NSMCE3Q96MG7 304 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 P2RX7Q99572 595 aaKnown RBP-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 KLF6Q99612 283 aaPredicted RBP-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 NPFFR1Q9GZQ6 430 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 CCSER2Q9H7U1 834 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 ZNF69Q9UC07 566 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 FEZ2Q9UHY8 353 aaPredicted RBP-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 LMTK3Q96Q04 1460 aa-0.81□□□□□ -2.54
RNU6-539P-201ENST00000516665 COL7A1Q02388 2944 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 SH2D7A6NKC9 451 aaPredicted RBP-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 KPNA7A9QM74 516 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 H7C4K7 107 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 MYO1CO00159 1063 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 SLC22A2O15244 555 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 IDH3BO43837 385 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 THY1P04216 161 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 HMBSP08397 361 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 RBL1P28749 1068 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 PSMD8P48556 350 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 CRISP1P54107 249 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 IGLV3-21P80748 117 aaPredicted RBP-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 SHC2P98077 582 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 SP3Q02447 781 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 TBL3Q12788 808 aaKnown RBP-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 NOGQ13253 232 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 ITGADQ13349 1161 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 LY6EQ16553 131 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 FAM122CQ6P4D5 195 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 KLHL24Q6TFL4 600 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 IGFL1Q6UW32 110 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 MFSD6Q6ZSS7 791 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 DPP9Q86TI2 863 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 SLC25A42Q86VD7 318 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 RBFAQ8N0V3 343 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 TMEM217Q8N7C4 229 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 PARD3BQ8TEW8 1205 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 TRIB2Q92519 343 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 SGF29Q96ES7 293 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 MPP4Q96JB8 637 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 LRFN5Q96NI6 719 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 HIST1H2AAQ96QV6 131 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 GAL3ST4Q96RP7 486 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 LHPPQ9H008 270 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 SIX2Q9NPC8 291 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 TMEM30AQ9NV96 361 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 MAP3K20Q9NYL2 800 aaKnown RBP-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 RPS6KB2Q9UBS0 482 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 ACAD8Q9UKU7 415 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 CFAP20Q9Y6A4 193 aaKnown RBP-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 MYH15Q9Y2K3 1946 aa-0.82□□□□□ -2.54
RNU6-539P-201ENST00000516665 TAF1P21675 1872 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 IGKV2-28A0A075B6P5 120 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 CTAGE9A4FU28 777 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 DUXAA6NLW8 204 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 SLCO1B7G3V0H7 640 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 PPP1R12AO14974 1030 aaPredicted RBP-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 TBX3O15119 743 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 NDUFS2O75306 463 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 CLPTM1O96005 669 aa-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms