RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 J3KR12 359 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 YY2O15391 372 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 KALRNO60229 2985 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 BUB1BO60566 1050 aaPredicted RBP12.33□□□□□ -0.44
SNHG4-208ENST00000514110 C1QL1O75973 258 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 TSHRP16473 764 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 CDK11BP21127 795 aaKnown RBP12.33□□□□□ -0.44
SNHG4-208ENST00000514110 AIF1P55008 147 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 ERVPABLB-1P60509 514 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 CXADRP78310 365 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 NCAPHQ15003 741 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 CA9Q16790 459 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 C3orf38Q5JPI3 329 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 C6orf132Q5T0Z8 1188 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 ACAD10Q6JQN1 1059 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 DCUN1D2Q6PH85 259 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 SASS6Q6UVJ0 657 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 NYAP1Q6ZVC0 841 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 GPR155Q7Z3F1 870 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 LSMEM2Q8N112 164 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 SLC39A7Q92504 469 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 ATXN7L3BQ96GX2 97 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 NCAPGQ9BPX3 1015 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 SYT11Q9BT88 431 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 C1QTNF7Q9BXJ2 289 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 SLC13A1Q9BZW2 595 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 SUV39H2Q9H5I1 410 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 LRRC19Q9H756 370 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 PDFQ9HBH1 243 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 PCDH12Q9NPG4 1184 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 ANO10Q9NW15 660 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 UBA2Q9UBT2 640 aaPredicted RBP12.33□□□□□ -0.44
SNHG4-208ENST00000514110 ENTPD2Q9Y5L3 495 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 LRRK1Q38SD2 2015 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 ASXL3Q9C0F0 2248 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 MGAQ8IWI9 3026 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 PTPRQQ9UMZ3 2332 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 GCN1Q92616 2671 aaKnown RBP12.32□□□□□ -0.44
SNHG4-208ENST00000514110 TEX51A0A1B0GUA7 166 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 TK2O00142 265 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 TOR1BO14657 336 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 RIOK3O14730 519 aaKnown RBP12.32□□□□□ -0.44
SNHG4-208ENST00000514110 FGF10O15520 208 aaPredicted RBP12.32□□□□□ -0.44
SNHG4-208ENST00000514110 PRAMEF11O60813 436 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 ANXA6P08133 673 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 ATP1A3P13637 1013 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 C6P13671 934 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 FERP16591 822 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 XPAP23025 273 aaPredicted RBP12.32□□□□□ -0.44
SNHG4-208ENST00000514110 SUOXP51687 545 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 TPI1P60174 286 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 PPARDQ03181 441 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 ELP6Q0PNE2 266 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 LRRC14Q15048 493 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 TCEA2Q15560 299 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 STX1AQ16623 288 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 UGP2Q16851 508 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 WSCD2Q2TBF2 565 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 PCSK4Q6UW60 755 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 RBM44Q6ZP01 1051 aaKnown RBP12.32□□□□□ -0.44
SNHG4-208ENST00000514110 IRF2BP2Q7Z5L9 587 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 ZSWIM9Q86XI8 627 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 DNAAF5Q86Y56 855 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 HID1Q8IV36 788 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 ARFGAP1Q8N6T3 406 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 TPCN2Q8NHX9 752 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 HCAR2Q8TDS4 363 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 TSACCQ96A04 125 aaPredicted RBP12.32□□□□□ -0.44
SNHG4-208ENST00000514110 PRR11Q96HE9 360 aaPredicted RBP12.32□□□□□ -0.44
SNHG4-208ENST00000514110 CELF6Q96J87 481 aaKnown RBP12.32□□□□□ -0.44
SNHG4-208ENST00000514110 VCPIP1Q96JH7 1222 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 TBATAQ96M53 351 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 CCDC3Q9BQI4 270 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 SLC39A8Q9C0K1 460 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 CPNE5Q9HCH3 593 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 OR1A2Q9Y585 309 aa12.32□□□□□ -0.44
SNHG4-208ENST00000514110 ATMQ13315 3056 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 TMCO5BA8MYB1 307 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 EEF2KO00418 725 aaKnown RBP12.31□□□□□ -0.44
SNHG4-208ENST00000514110 TEX33O43247 280 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 ATMINO43313 823 aaPredicted RBP12.31□□□□□ -0.44
SNHG4-208ENST00000514110 PRKCGP05129 697 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 HTR7P34969 479 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 MMP12P39900 470 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 RGRP47804 291 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 RPIAP49247 311 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 LIG3P49916 1009 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 PEX5P50542 639 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 PAPOLAP51003 745 aaKnown RBP12.31□□□□□ -0.44
SNHG4-208ENST00000514110 HK3P52790 923 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 NDST2P52849 883 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 PDX1P52945 283 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 MAMLD1Q13495 774 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 INPP5AQ14642 412 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 GRM3Q14832 879 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 ALG11Q2TAA5 492 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 KCTD16Q68DU8 428 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 IGF2-ASQ6U949 168 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 CAMK1DQ8IU85 385 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 KYQ8NBH2 561 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms