RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 NSMCE3Q96MG7 304 aa15.06■□□□□ 0
VCAN-211ENST00000513984 GCNAQ96QF7 691 aa15.06■□□□□ 0
VCAN-211ENST00000513984 FEM1AQ9BSK4 669 aa15.06■□□□□ 0
VCAN-211ENST00000513984 C1QTNF1Q9BXJ1 281 aa15.06■□□□□ 0
VCAN-211ENST00000513984 SCUBE2Q9NQ36 999 aa15.06■□□□□ 0
VCAN-211ENST00000513984 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.06■□□□□ 0
VCAN-211ENST00000513984 CHKBQ9Y259 395 aa15.06■□□□□ 0
VCAN-211ENST00000513984 SLC4A7Q9Y6M7 1214 aa15.06■□□□□ 0
VCAN-211ENST00000513984 MYOFQ9NZM1 2061 aa15.05■□□□□ 0
VCAN-211ENST00000513984 A0A1W2PRU2 124 aa15.05■□□□□ -0
VCAN-211ENST00000513984 HIDE1A8MVS5 230 aa15.05■□□□□ -0
VCAN-211ENST00000513984 NRG2O14511 850 aaPredicted RBP15.05■□□□□ -0
VCAN-211ENST00000513984 TLL1O43897 1013 aa15.05■□□□□ -0
VCAN-211ENST00000513984 SNAP91O60641 907 aa15.05■□□□□ -0
VCAN-211ENST00000513984 DNAJC8O75937 253 aaPredicted RBP15.05■□□□□ -0
VCAN-211ENST00000513984 TMCC1O94876 653 aa15.05■□□□□ -0
VCAN-211ENST00000513984 SLC35E2BP0CK96 405 aa15.05■□□□□ -0
VCAN-211ENST00000513984 COL6A2P12110 1019 aa15.05■□□□□ -0
VCAN-211ENST00000513984 MZF1P28698 734 aaPredicted RBP15.05■□□□□ -0
VCAN-211ENST00000513984 LEPRP48357 1165 aaKnown RBP15.05■□□□□ -0
VCAN-211ENST00000513984 SCNN1BP51168 640 aa15.05■□□□□ -0
VCAN-211ENST00000513984 C1QTNF8P60827 252 aa15.05■□□□□ -0
VCAN-211ENST00000513984 STX3Q13277 289 aa15.05■□□□□ -0
VCAN-211ENST00000513984 SETDB1Q15047 1291 aa15.05■□□□□ -0
VCAN-211ENST00000513984 TAF1BQ53T94 588 aaPredicted RBP15.05■□□□□ -0
VCAN-211ENST00000513984 INO80DQ53TQ3 878 aaPredicted RBP15.05■□□□□ -0
VCAN-211ENST00000513984 MFSD6LQ8IWD5 586 aa15.05■□□□□ -0
VCAN-211ENST00000513984 C10orf67Q8IYJ2 551 aa15.05■□□□□ -0
VCAN-211ENST00000513984 MRPL43Q8N983 215 aaKnown RBP15.05■□□□□ -0
VCAN-211ENST00000513984 ALG14Q96F25 216 aa15.05■□□□□ -0
VCAN-211ENST00000513984 TDRD1Q9BXT4 1180 aaKnown RBP15.05■□□□□ -0
VCAN-211ENST00000513984 KCNK13Q9HB14 408 aa15.05■□□□□ -0
VCAN-211ENST00000513984 ASAH2Q9NR71 780 aa15.05■□□□□ -0
VCAN-211ENST00000513984 THAP1Q9NVV9 213 aa15.05■□□□□ -0
VCAN-211ENST00000513984 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.05■□□□□ -0
VCAN-211ENST00000513984 CFAP97Q9P2B7 532 aa15.05■□□□□ -0
VCAN-211ENST00000513984 DNMT3BQ9UBC3 853 aaKnown RBP15.05■□□□□ -0
VCAN-211ENST00000513984 E2F8A0AVK6 867 aa15.04■□□□□ -0
VCAN-211ENST00000513984 EN2P19622 333 aaPredicted RBP15.04■□□□□ -0
VCAN-211ENST00000513984 KCNA4P22459 653 aa15.04■□□□□ -0
VCAN-211ENST00000513984 ARSDP51689 593 aa15.04■□□□□ -0
VCAN-211ENST00000513984 CLCN4P51793 760 aa15.04■□□□□ -0
VCAN-211ENST00000513984 RAB10P61026 200 aa15.04■□□□□ -0
VCAN-211ENST00000513984 SLC12A1Q13621 1099 aa15.04■□□□□ -0
VCAN-211ENST00000513984 CDH18Q13634 790 aa15.04■□□□□ -0
VCAN-211ENST00000513984 SPDYAQ5MJ70 313 aa15.04■□□□□ -0
VCAN-211ENST00000513984 MPP7Q5T2T1 576 aa15.04■□□□□ -0
VCAN-211ENST00000513984 PLPP4Q5VZY2 271 aa15.04■□□□□ -0
VCAN-211ENST00000513984 ZCCHC23Q6ZST2 131 aa15.04■□□□□ -0
VCAN-211ENST00000513984 RAPH1Q70E73 1250 aa15.04■□□□□ -0
VCAN-211ENST00000513984 RTL10Q7L3V2 364 aa15.04■□□□□ -0
VCAN-211ENST00000513984 CILP2Q8IUL8 1156 aa15.04■□□□□ -0
VCAN-211ENST00000513984 SLC41A1Q8IVJ1 513 aa15.04■□□□□ -0
VCAN-211ENST00000513984 DCAF4L2Q8NA75 395 aa15.04■□□□□ -0
VCAN-211ENST00000513984 WFDC5Q8TCV5 224 aa15.04■□□□□ -0
VCAN-211ENST00000513984 BLOC1S5Q8TDH9 187 aa15.04■□□□□ -0
VCAN-211ENST00000513984 SLC22A17Q8WUG5 538 aa15.04■□□□□ -0
VCAN-211ENST00000513984 PPM1EQ8WY54 764 aa15.04■□□□□ -0
VCAN-211ENST00000513984 EXOC2Q96KP1 924 aa15.04■□□□□ -0
VCAN-211ENST00000513984 LRRC37BQ96QE4 947 aa15.04■□□□□ -0
VCAN-211ENST00000513984 CORO1BQ9BR76 489 aa15.04■□□□□ -0
VCAN-211ENST00000513984 DCTN4Q9UJW0 460 aa15.04■□□□□ -0
VCAN-211ENST00000513984 VPS28Q9UK41 221 aa15.04■□□□□ -0
VCAN-211ENST00000513984 TLK1Q9UKI8 766 aa15.04■□□□□ -0
VCAN-211ENST00000513984 SH3BP1Q9Y3L3 701 aa15.04■□□□□ -0
VCAN-211ENST00000513984 CAPN7Q9Y6W3 813 aa15.04■□□□□ -0
VCAN-211ENST00000513984 CCL16O15467 120 aa15.03■□□□□ -0
VCAN-211ENST00000513984 HAUS5O94927 633 aa15.03■□□□□ -0
VCAN-211ENST00000513984 PRLP01236 227 aa15.03■□□□□ -0
VCAN-211ENST00000513984 SERPINE1P05121 402 aa15.03■□□□□ -0
VCAN-211ENST00000513984 APOA4P06727 396 aa15.03■□□□□ -0
VCAN-211ENST00000513984 MYL4P12829 197 aa15.03■□□□□ -0
VCAN-211ENST00000513984 CPA3P15088 417 aa15.03■□□□□ -0
VCAN-211ENST00000513984 STMN1P16949 149 aa15.03■□□□□ -0
VCAN-211ENST00000513984 GRK2P25098 689 aa15.03■□□□□ -0
VCAN-211ENST00000513984 CRABP2P29373 138 aa15.03■□□□□ -0
VCAN-211ENST00000513984 CSKP41240 450 aa15.03■□□□□ -0
VCAN-211ENST00000513984 CLCN5P51795 746 aa15.03■□□□□ -0
VCAN-211ENST00000513984 EPHA5P54756 1037 aa15.03■□□□□ -0
VCAN-211ENST00000513984 PRAMEP78395 509 aa15.03■□□□□ -0
VCAN-211ENST00000513984 POU4F1Q01851 419 aa15.03■□□□□ -0
VCAN-211ENST00000513984 PPM1LQ5SGD2 360 aa15.03■□□□□ -0
VCAN-211ENST00000513984 C10orf107Q8IVU9 208 aa15.03■□□□□ -0
VCAN-211ENST00000513984 BBS7Q8IWZ6 715 aa15.03■□□□□ -0
VCAN-211ENST00000513984 TDRD5Q8NAT2 981 aaKnown RBP15.03■□□□□ -0
VCAN-211ENST00000513984 OR6Y1Q8NGX8 325 aa15.03■□□□□ -0
VCAN-211ENST00000513984 SPPL3Q8TCT6 385 aa15.03■□□□□ -0
VCAN-211ENST00000513984 STYXQ8WUJ0 223 aa15.03■□□□□ -0
VCAN-211ENST00000513984 POF1BQ8WVV4 589 aa15.03■□□□□ -0
VCAN-211ENST00000513984 HDAC10Q969S8 669 aa15.03■□□□□ -0
VCAN-211ENST00000513984 C20orf27Q9GZN8 174 aa15.03■□□□□ -0
VCAN-211ENST00000513984 MYLK2Q9H1R3 596 aa15.03■□□□□ -0
VCAN-211ENST00000513984 NMRAL1Q9HBL8 299 aa15.03■□□□□ -0
VCAN-211ENST00000513984 TLR9Q9NR96 1032 aa15.03■□□□□ -0
VCAN-211ENST00000513984 LHX3Q9UBR4 397 aa15.03■□□□□ -0
VCAN-211ENST00000513984 VPS51Q9UID3 782 aa15.03■□□□□ -0
VCAN-211ENST00000513984 MID2Q9UJV3 735 aa15.03■□□□□ -0
VCAN-211ENST00000513984 RWDD3Q9Y3V2 267 aa15.03■□□□□ -0
VCAN-211ENST00000513984 KCTD3Q9Y597 815 aa15.03■□□□□ -0
VCAN-211ENST00000513984 ARL5AQ9Y689 179 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms