RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 ZNF106Q9H2Y7 1883 aaKnown RBP12.95□□□□□ -0.34
PVT1-203ENST00000513868 RFXAPO00287 272 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 NDUFAB1O14561 156 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 TPP1O14773 563 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 AHSGP02765 367 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 TAC1P20366 129 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 WEE1P30291 646 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 SPRP35270 261 aaPredicted RBP12.94□□□□□ -0.34
PVT1-203ENST00000513868 CSRP3P50461 194 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 CSE1LP55060 971 aaKnown RBP12.94□□□□□ -0.34
PVT1-203ENST00000513868 RHOAP61586 193 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 IL9RQ01113 521 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 ACVR1Q04771 509 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 TRAF2Q12933 501 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 SLC12A1Q13621 1099 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 RAB30Q15771 203 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 ZSCAN26Q16670 478 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 PITRM1Q5JRX3 1037 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 LY6G5CQ5SRR4 150 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 ATXN7L2Q5T6C5 722 aaPredicted RBP12.94□□□□□ -0.34
PVT1-203ENST00000513868 RETSATQ6NUM9 610 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 ELMSAN1Q6PJG2 1045 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 DENND6AQ8IWF6 608 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 DCLK2Q8N568 766 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 ACVR1CQ8NER5 493 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 BRSK1Q8TDC3 778 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 ACMSDQ8TDX5 336 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 VOPP1Q96AW1 172 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 SMIM14Q96QK8 99 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 SRPK1Q96SB4 655 aaKnown RBP12.94□□□□□ -0.34
PVT1-203ENST00000513868 SPHK2Q9NRA0 654 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 TXNDC16Q9P2K2 825 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 TBC1D14Q9P2M4 693 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 MSRAQ9UJ68 235 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 MTO1Q9Y2Z2 717 aaKnown RBP12.94□□□□□ -0.34
PVT1-203ENST00000513868 PLLPQ9Y342 182 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 SPO11Q9Y5K1 396 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 WNT6Q9Y6F9 365 aa12.94□□□□□ -0.34
PVT1-203ENST00000513868 KIAA1549LQ6ZVL6 1849 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 CXorf51AA0A1B0GTR3 108 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 TCP11X1B4DZS4 312 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 NEDD8-MDP1E9PL57 170 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 COPEO14579 308 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 FZD6O60353 706 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 TOP3BO95985 862 aaKnown RBP12.93□□□□□ -0.34
PVT1-203ENST00000513868 PIRTP0C851 137 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 PAMP19021 973 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 CRHR1P34998 444 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 CTSOP43234 321 aaPredicted RBP12.93□□□□□ -0.34
PVT1-203ENST00000513868 ABCG1P45844 678 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 ARSDP51689 593 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 CTBP1Q13363 440 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 PDE1CQ14123 709 aaPredicted RBP12.93□□□□□ -0.34
PVT1-203ENST00000513868 PDK4Q16654 411 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 FUT11Q495W5 492 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 RALGPS1Q5JS13 557 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 RGS9BPQ6ZS82 235 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 NLRP9Q7RTR0 991 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 SRLQ86TD4 932 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 TAX1BP1Q86VP1 789 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 ZC3HC1Q86WB0 502 aaKnown RBP12.93□□□□□ -0.34
PVT1-203ENST00000513868 OTUB2Q96DC9 234 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 VPS39Q96JC1 886 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 PAIP2Q9BPZ3 127 aaKnown RBP12.93□□□□□ -0.34
PVT1-203ENST00000513868 BBS2Q9BXC9 721 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 SLC13A1Q9BZW2 595 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 FAM107BQ9H098 131 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 SFXN1Q9H9B4 322 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 PCMTD2Q9NV79 361 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 NSMCE4AQ9NXX6 385 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 MARK1Q9P0L2 795 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 ARL5AQ9Y689 179 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 CCDC85CA6NKD9 419 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 AURKAO14965 403 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 GLP2RO95838 553 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 TYRP14679 529 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 SLC1A2P43004 574 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 CSNK1DP48730 415 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 MPP1Q00013 466 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 PDE1BQ01064 536 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 SLC20A2Q08357 652 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 PTPRCAPQ14761 206 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 DGKKQ5KSL6 1271 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 HHATQ5VTY9 493 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 NEPROQ6NW34 567 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 KIAA0907Q7Z7F0 614 aaPredicted RBP12.93□□□□□ -0.34
PVT1-203ENST00000513868 CNPY4Q8N129 248 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 NDUFAF2Q8N183 169 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 CELF5Q8N6W0 485 aaKnown RBP12.93□□□□□ -0.34
PVT1-203ENST00000513868 C2CD4AQ8NCU7 369 aaPredicted RBP12.93□□□□□ -0.34
PVT1-203ENST00000513868 MDGA1Q8NFP4 955 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 BLOC1S5Q8TDH9 187 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 PEX13Q92968 403 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 ATXN7L3BQ96GX2 97 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 FAM111AQ96PZ2 611 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 RHOJQ9H4E5 214 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 SLC28A3Q9HAS3 691 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■■■□ 22.1
PVT1-203ENST00000513868 CDH22Q9UJ99 828 aa12.93□□□□□ -0.34
PVT1-203ENST00000513868 RIMKLBQ9ULI2 386 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms