RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	LHX3	Q9UBR4	397 aa		7.55	□□□□□ -1.2
NR1I3-231	ENST00000512340	EIF2B4	Q9UI10	523 aa	Known RBP	7.55	□□□□□ -1.2
NR1I3-231	ENST00000512340	MBD1	Q9UIS9	605 aa	Predicted RBP	7.55	□□□□□ -1.2
NR1I3-231	ENST00000512340	PILRB	Q9UKJ0	227 aa		7.55	□□□□□ -1.2
NR1I3-231	ENST00000512340	TRHDE	Q9UKU6	1024 aa		7.55	□□□□□ -1.2
NR1I3-231	ENST00000512340	CDV3	Q9UKY7	258 aa	Known RBP	7.55	□□□□□ -1.2
NR1I3-231	ENST00000512340	RPL26L1	Q9UNX3	145 aa	Known RBP	7.55	□□□□□ -1.2
NR1I3-231	ENST00000512340	PPP2R2C	Q9Y2T4	447 aa		7.55	□□□□□ -1.2
NR1I3-231	ENST00000512340	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	7.55	□□□□□ -1.2
NR1I3-231	ENST00000512340	REXO2	Q9Y3B8	237 aa	Known RBP	7.55	□□□□□ -1.2
NR1I3-231	ENST00000512340	DUSP10	Q9Y6W6	482 aa		7.55	□□□□□ -1.2
NR1I3-231	ENST00000512340	PI4KA	P42356	2102 aa		7.55	□□□□□ -1.2
NR1I3-231	ENST00000512340	KNL1	Q8NG31	2342 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	hCG_1818297	A0A087WSY0	165 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340		A0A1W2PPC4	97 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	CFAP69	A5D8W1	941 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	RCCD1	A6NED2	376 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	C3orf70	A6NLC5	250 aa	Predicted RBP	7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	UPK3BL1	B0FP48	263 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	UPK3BL2	E5RIL1	263 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	YKT6	O15498	198 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	FTCD	O95954	541 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	CD160	O95971	181 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	JCHAIN	P01591	159 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	ITPKA	P23677	461 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	DRD3	P35462	400 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	PTGER3	P43115	390 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	GRIA4	P48058	902 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	IFI35	P80217	286 aa	Predicted RBP	7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	GBE1	Q04446	702 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	SLC10A7	Q0GE19	358 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	ARHGEF7	Q14155	803 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	SUZ12	Q15022	739 aa	Known RBP	7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	TAZ	Q16635	292 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	UGP2	Q16851	508 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	INAVA	Q3KP66	663 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	POM121L1P	Q3SYA9	428 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	HS1BP3	Q53T59	392 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	ARTN	Q5T4W7	220 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	AGBL4	Q5VU57	503 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	NAPEPLD	Q6IQ20	393 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	DARS2	Q6PI48	645 aa	Known RBP	7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	SLC23A3	Q6PIS1	610 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	PRR23C	Q6ZRP0	262 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	IQCH	Q86VS3	1027 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	AADAT	Q8N5Z0	425 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	DEFB119	Q8N690	84 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	TEX26	Q8N6G2	289 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	PQLC3	Q8N755	202 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	NETO1	Q8TDF5	533 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	ASB12	Q8WXK4	309 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	MAML1	Q92585	1016 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	BIRC7	Q96CA5	298 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	IFT43	Q96FT9	208 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	HES6	Q96HZ4	224 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	EXOC2	Q96KP1	924 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	SEMA3C	Q99985	751 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	RTKN	Q9BST9	563 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	C6orf106	Q9H6K1	298 aa	Predicted RBP	7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	TMEM9B	Q9NQ34	198 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	PHTF1	Q9UMS5	762 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	TFR2	Q9UP52	801 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	ATP8A1	Q9Y2Q0	1164 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	JRKL	Q9Y4A0	524 aa		7.54	□□□□□ -1.2
NR1I3-231	ENST00000512340	CACNA1E	Q15878	2313 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	SPTBN2	O15020	2390 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	CACNA1G	O43497	2377 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	CHD8	Q9HCK8	2581 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	TRPM6	Q9BX84	2022 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340		A0A1W2PQU0	124 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	PDE2A	O00408	941 aa	Predicted RBP	7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	ARHGAP33	O14559	1287 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	FPGT	O14772	594 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	LAT	O43561	262 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	LZTS3	O60299	673 aa	Predicted RBP	7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	OPHN1	O60890	802 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	ZNF821	O75541	412 aa	Predicted RBP	7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	ANXA9	O76027	345 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	TM7SF2	O76062	418 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	CP	P00450	1065 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	PYGL	P06737	847 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	CTSL	P07711	333 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	ELFN1	P0C7U0	828 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	HNRNPA2B1	P22626	353 aa	Known RBP	7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	CD38	P28907	300 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	ARRB1	P49407	418 aa	Predicted RBP	7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	PEX5	P50542	639 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	EIF3E	P60228	445 aa	Known RBP	7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	CCZ1B	P86790	482 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	CCZ1	P86791	482 aa	Predicted RBP	7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	NUMA1	Q14980	2115 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	TEX44	Q53QW1	395 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	PLA2G2C	Q5R387	149 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	PIP5KL1	Q5T9C9	394 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	PEAR1	Q5VY43	1037 aa	Predicted RBP	7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	C4orf22	Q6V702	233 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	ARHGAP36	Q6ZRI8	547 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	PARS2	Q7L3T8	475 aa	Known RBP	7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	ZCCHC9	Q8N567	271 aa	Known RBP	7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	MFSD2A	Q8NA29	543 aa		7.53	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms