RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 COMTP21964 271 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 CCNCP24863 283 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 HSPA9P38646 679 aaKnown RBP16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 GARSP41250 739 aaKnown RBP16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 NOP2P46087 812 aaKnown RBP16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 CCT8P50990 548 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 GBE1Q04446 702 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 BCL2L1Q07817 233 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 SPA17Q15506 151 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 GCNT7Q6ZNI0 430 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 GLRX5Q86SX6 157 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 SLCO6A1Q86UG4 719 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 OR13H1Q8NG92 308 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 BAHD1Q8TBE0 780 aaPredicted RBP16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 ATP13A3Q9H7F0 1226 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 NOD2Q9HC29 1040 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 PCDH12Q9NPG4 1184 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 HYOU1Q9Y4L1 999 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 KNTC1P50748 2209 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 RCCD1A6NED2 376 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 MATN3O15232 486 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 HTRA2O43464 458 aaPredicted RBP16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 MFSD11O43934 449 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 TM7SF2O76062 418 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 NDUFA10O95299 355 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 CYLC1P35663 651 aaPredicted RBP16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 AP1S1P61966 158 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 POLR2LP62875 67 aaKnown RBP16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 IL9RQ01113 521 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 IHHQ14623 411 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 RAD9BQ6WBX8 426 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 KANSL1Q7Z3B3 1105 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 VSIG1Q86XK7 387 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 GATAD2AQ86YP4 633 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 DCP2Q8IU60 420 aaKnown RBP16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 RHOT1Q8IXI2 618 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 ATPAF2Q8N5M1 289 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 NSMCE1Q8WV22 266 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 SPOCK2Q92563 424 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 MAML1Q92585 1016 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 FATE1Q969F0 183 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 NUDCD1Q96RS6 583 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 MGME1Q9BQP7 344 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 GPR27Q9NS67 375 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 SALL4Q9UJQ4 1053 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 PCDHGC4Q9Y5F7 938 aa16.27■□□□□ 0.2
PDLIM5-216ENST00000511767 TMEM131Q92545 1883 aa16.27■□□□□ 0.19
PDLIM5-216ENST00000511767 A0A0A6YYK5 440 aaPredicted RBP16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 LRRD1A4D1F6 860 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 CFAP69A5D8W1 941 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 SOWAHDA6NJG2 315 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 MAP3K6O95382 1288 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 TOP3BO95985 862 aaKnown RBP16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 XPAP23025 273 aaPredicted RBP16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 SERPINA4P29622 427 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 MMP13P45452 471 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 ARRB1P49407 418 aaPredicted RBP16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 MAXP61244 160 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 SHC2P98077 582 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 SEMG2Q02383 582 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 ELP6Q0PNE2 266 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 TAZQ16635 292 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 IFI16Q16666 785 aaKnown RBP16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 RALGPS1Q5JS13 557 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 ZFYVE27Q5T4F4 411 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 SLC9A4Q6AI14 798 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 SLC22A18ASQ8N1D0 253 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 CBARPQ8N350 705 aaPredicted RBP16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 SLC25A45Q8N413 288 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 OXR1Q8N573 874 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 PLD5Q8N7P1 536 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 CXorf40AQ8TE69 158 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 LRRN4Q8WUT4 740 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 RNF25Q96BH1 459 aaPredicted RBP16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 CDC6Q99741 560 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 WRAP53Q9BUR4 548 aaKnown RBP16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 DTLQ9NZJ0 730 aa16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 REXO2Q9Y3B8 237 aaKnown RBP16.26■□□□□ 0.19
PDLIM5-216ENST00000511767 FPGTO14772 594 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 YKT6O15498 198 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 PRKCGP05129 697 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 ITGAVP06756 1048 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 TNNT1P13805 278 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 GRK6P43250 576 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 LIG3P49916 1009 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 PFN3P60673 137 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 ZNF235Q14590 738 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 MFSD7Q6UXD7 560 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 BBS5Q8N3I7 341 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 DENND6BQ8NEG7 585 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 IFT43Q96FT9 208 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 MAK16Q9BXY0 300 aaKnown RBP16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 GOLPH3Q9H4A6 298 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 CAAP1Q9H8G2 361 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 NT5MQ9NPB1 228 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 SCUBE2Q9NQ36 999 aa16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 MBNL1Q9NR56 388 aaKnown RBP16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 RBM22Q9NW64 420 aaKnown RBP eCLIP16.25■□□□□ 0.19
PDLIM5-216ENST00000511767 DDX56Q9NY93 547 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms