RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 ATP13A4Q4VNC1 1196 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 SH2D4BQ5SQS7 431 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 LDLRAP1Q5SW96 308 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 CACHD1Q5VU97 1274 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 POTEHQ6S545 545 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 SLC36A4Q6YBV0 504 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 NKAPQ8N5F7 415 aaKnown RBP5.17□□□□□ -1.58
PHF3-210ENST00000509876 DCAF4L2Q8NA75 395 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 OR4L1Q8NH43 312 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 NCLNQ969V3 563 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 TRMT2BQ96GJ1 504 aaKnown RBP5.17□□□□□ -1.58
PHF3-210ENST00000509876 ETNK1Q9HBU6 452 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 HCFC2Q9Y5Z7 792 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 COL4A1P02462 1669 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 C2orf78A6NCI8 922 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 C5orf60A6NFR6 353 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 URADA6NGE7 173 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 RNF225M0QZC1 329 aaPredicted RBP5.17□□□□□ -1.58
PHF3-210ENST00000509876 SLC31A1O15431 190 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 DLDP09622 509 aaKnown RBP5.17□□□□□ -1.58
PHF3-210ENST00000509876 GP5P40197 560 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 PBX1P40424 430 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 CCNG1P51959 295 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 IL2P60568 153 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 MAGOHP61326 146 aaKnown RBP5.17□□□□□ -1.58
PHF3-210ENST00000509876 HNRNPDQ14103 355 aaKnown RBP5.17□□□□□ -1.58
PHF3-210ENST00000509876 NOMO1Q15155 1222 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 TAF5Q15542 800 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 SGO1Q5FBB7 561 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 NEPROQ6NW34 567 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 FAM171BQ6P995 826 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 ZNF662Q6ZS27 426 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 ZNF398Q8TD17 642 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 PTCD2Q8WV60 388 aaKnown RBP5.17□□□□□ -1.58
PHF3-210ENST00000509876 FOXJ1Q92949 421 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 SERPINI1Q99574 410 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 ACE2Q9BYF1 805 aaPredicted RBP5.17□□□□□ -1.58
PHF3-210ENST00000509876 PITPNM3Q9BZ71 974 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 CDH19Q9H159 772 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 XYLT2Q9H1B5 865 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 ECT2Q9H8V3 914 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 CYP8B1Q9UNU6 501 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 EIF3LQ9Y262 564 aaKnown RBP5.17□□□□□ -1.58
PHF3-210ENST00000509876 SNX10Q9Y5X0 201 aa5.17□□□□□ -1.58
PHF3-210ENST00000509876 NEMP2A6NFY4 417 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 C5orf58C9J3I9 102 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 GOLGA8RI6L899 631 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 AP5Z1O43299 807 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 DIAPH2O60879 1101 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 RPP40O75818 363 aaKnown RBP5.16□□□□□ -1.58
PHF3-210ENST00000509876 ANXA5P08758 320 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 SKIV2L2P42285 1042 aaKnown RBP5.16□□□□□ -1.58
PHF3-210ENST00000509876 PTP4A2Q12974 167 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 CAPRIN1Q14444 709 aaKnown RBP5.16□□□□□ -1.58
PHF3-210ENST00000509876 MYLK3Q32MK0 819 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 C9orf50Q5SZB4 431 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 STXBP5Q5T5C0 1151 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 C22orf39Q6P5X5 142 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 LPCAT2Q7L5N7 544 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 TAS1R1Q7RTX1 841 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 KBTBD6Q86V97 674 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 SLC26A7Q8TE54 656 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 TUBGCP5Q96RT8 1024 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 SUV39H2Q9H5I1 410 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 WDR26Q9H7D7 661 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 MRPL40Q9NQ50 206 aaKnown RBP5.16□□□□□ -1.58
PHF3-210ENST00000509876 TMEM248Q9NWD8 314 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 DNAJC16Q9Y2G8 782 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 BCLAF3A2AJT9 711 aaKnown RBP5.16□□□□□ -1.58
PHF3-210ENST00000509876 HIDE1A8MVS5 230 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 PRR5-ARHGAP8B1AHC4 643 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 RFXAPO00287 272 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 CCNT2O60583 730 aaKnown RBP5.16□□□□□ -1.58
PHF3-210ENST00000509876 VIPR2P41587 438 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 DUSP3P51452 185 aaPredicted RBP5.16□□□□□ -1.58
PHF3-210ENST00000509876 SF3A3Q12874 501 aaKnown RBP eCLIP5.16□□□□□ -1.58
PHF3-210ENST00000509876 CSHL1Q14406 222 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 EFTUD2Q15029 972 aaKnown RBP eCLIP5.16□□□□□ -1.585e-6■■■□□ 14.6
PHF3-210ENST00000509876 DPYSL2Q16555 572 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 PLA2G4EQ3MJ16 856 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 OLFML1Q6UWY5 402 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 SIX5Q8N196 739 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 PIP4K2CQ8TBX8 421 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 FAM136AQ96C01 138 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 CLSTN3Q9BQT9 956 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 LMAN1LQ9HAT1 526 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 SAE1Q9UBE0 346 aaPredicted RBP5.16□□□□□ -1.58
PHF3-210ENST00000509876 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.16□□□□□ -1.58
PHF3-210ENST00000509876 GNGT2O14610 69 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 RRP9O43818 475 aaKnown RBP5.16□□□□□ -1.58
PHF3-210ENST00000509876 KATNA1O75449 491 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 GSRP00390 522 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 TNNI3P19429 210 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 VIPR1P32241 457 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 ELK3P41970 407 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 CXCR3P49682 368 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 CLCN5P51795 746 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 PPP2R2AP63151 447 aa5.16□□□□□ -1.58
PHF3-210ENST00000509876 PLOD1Q02809 727 aaPredicted RBP5.16□□□□□ -1.58
PHF3-210ENST00000509876 STX3Q13277 289 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms