RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 PIP4K2CQ8TBX8 421 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 OSER1Q9NX31 292 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 ABI2Q9NYB9 513 aaPredicted RBP18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 PATJQ8NI35 1801 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 NYNRINQ9P2P1 1898 aaKnown RBP18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 NEMP2A6NFY4 417 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 TXNDC9O14530 226 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 IPO13O94829 963 aaKnown RBP18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 PAPSS2O95340 614 aaPredicted RBP18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 OR4Q2P0C623 313 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 XRCC1P18887 633 aaPredicted RBP18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 CD86P42081 329 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 PKNOX1P55347 436 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 PFKPQ01813 784 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 RARS2Q5T160 578 aaKnown RBP18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 NAIF1Q69YI7 327 aaPredicted RBP18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 SLC30A9Q6PML9 568 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 ARHGAP18Q8N392 663 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 USP13Q92995 863 aaPredicted RBP18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 OLFM1Q99784 485 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 MRPL1Q9BYD6 325 aaKnown RBP18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 CYP4F12Q9HCS2 524 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 FIS1Q9Y3D6 152 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 MYLKQ15746 1914 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 CCDC166P0CW27 439 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 RHOQP17081 205 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 TBX4P57082 545 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 MRPS22P82650 360 aaKnown RBP18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 CEACAM7Q14002 265 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 PSMD5Q16401 504 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 FOXB2Q5VYV0 432 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 ZNF280DQ6N043 979 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 TFAP2DQ7Z6R9 452 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 ZNF354CQ86Y25 554 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 TMEM126BQ8IUX1 230 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 DLG3Q92796 817 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 UPF1Q92900 1129 aaKnown RBP eCLIP18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 FATE1Q969F0 183 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 PABPC5Q96DU9 382 aaKnown RBP18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 CENPKQ9BS16 269 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 ZYG11BQ9C0D3 744 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 NOL6Q9H6R4 1146 aaKnown RBP18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 SP110Q9HB58 689 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 ATP13A1Q9HD20 1204 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 PAPOLBQ9NRJ5 636 aaKnown RBP18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 SCML2Q9UQR0 700 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 NLRC5Q86WI3 1866 aa18.06■□□□□ 0.48
CCHCR1-228ENST00000509552 F8W810 466 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 PEX11BO96011 259 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 HSPA1AP0DMV8 641 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 HSPA1BP0DMV9 641 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 SULT2A1Q06520 285 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 LPIN1Q14693 890 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 ACAP2Q15057 778 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 MAPRE2Q15555 327 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 ZNF789Q5FWF6 425 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 SLC22A9Q8IVM8 553 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 DCP1BQ8IZD4 617 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 NUP93Q8N1F7 819 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 CATSPER1Q8NEC5 780 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 ZNF483Q8TF39 744 aaPredicted RBP18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 TMA16Q96EY4 203 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 UPF3AQ9H1J1 476 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 FBXO44Q9H4M3 255 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 TCAF2A6NFQ2 919 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 A8MT66 165 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 ZNF157P51786 506 aaPredicted RBP18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 MAXP61244 160 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 FOLH1Q04609 750 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 STX5Q13190 355 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 HECTD2Q5U5R9 776 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 MFSD14CQ5VZR4 134 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 PTAR1Q7Z6K3 402 aaPredicted RBP18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 GALNT7Q86SF2 657 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 PELI3Q8N2H9 469 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 BHLHE22Q8NFJ8 381 aaPredicted RBP18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 SPDYE1Q8NFV5 336 aaPredicted RBP18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 HMCESQ96FZ2 354 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 SLC39A13Q96H72 371 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 NPAS2Q99743 824 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 Q9H521 79 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 SUDS3Q9H7L9 328 aaPredicted RBP18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 TMEM248Q9NWD8 314 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 UTP6Q9NYH9 597 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 VWA7Q9Y334 891 aa18.05■□□□□ 0.48
CCHCR1-228ENST00000509552 J3KR12 359 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 SLC7A4O43246 635 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 CYBAP13498 195 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 PDK3Q15120 406 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 GPR162Q16538 588 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 MSANTD2Q6P1R3 559 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 CUZD1Q86UP6 607 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 CILP2Q8IUL8 1156 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 RNF148Q8N7C7 305 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 OR6P1Q8NGX9 317 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 SPPL2BQ8TCT7 592 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 DCUN1D1Q96GG9 259 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 KLHL5Q96PQ7 755 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 PIDD1Q9HB75 910 aa18.04■□□□□ 0.48
CCHCR1-228ENST00000509552 MRPL40Q9NQ50 206 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms