RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 NAB2Q15742 525 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 C3orf38Q5JPI3 329 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 RARS2Q5T160 578 aaKnown RBP3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 ARHGAP40Q5TG30 622 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 ATF7IP2Q5U623 682 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 LMBRD2Q68DH5 695 aaPredicted RBP3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 RINT1Q6NUQ1 792 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 FAM173BQ6P4H8 233 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 VWA1Q6PCB0 445 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 CD300LGQ6UXG3 332 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 GPR65Q8IYL9 337 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 DAW1Q8N136 415 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 SYT2Q8N9I0 419 aaPredicted RBP3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 LINC00301Q8NCQ3 95 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 CMASQ8NFW8 434 aaPredicted RBP3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 ACTRT2Q8TDY3 377 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 KBTBD7Q8WVZ9 684 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 MAML1Q92585 1016 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 FAM122AQ96E09 287 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 B3GALT6Q96L58 329 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 IFT74Q96LB3 600 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 RIPOR3Q96MK2 946 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 AGAP2Q99490 1192 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 PAAF1Q9BRP4 392 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 ADPGKQ9BRR6 497 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 NTPCRQ9BSD7 190 aaKnown RBP3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 TIPINQ9BVW5 301 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 AMBRA1Q9C0C7 1298 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 CCSER1Q9C0I3 900 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 MS4A7Q9GZW8 240 aaPredicted RBP3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 TOR3AQ9H497 397 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 POMKQ9H5K3 350 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 SFXN1Q9H9B4 322 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 C17orf75Q9HAS0 396 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 FNIP2Q9P278 1114 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 LRIT1Q9P2V4 623 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 CACNG4Q9UBN1 327 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 RCOR1Q9UKL0 485 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 ADAM28Q9UKQ2 775 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 TNFSF13BQ9Y275 285 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 MRPS17Q9Y2R5 130 aaKnown RBP3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 SRPRBQ9Y5M8 271 aaKnown RBP3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 CLIC4Q9Y696 253 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 NCOR1O75376 2440 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 PCSK5Q92824 1860 aa3.77□□□□□ -1.81
UBE2D3-226ENST00000508635 TRIOO75962 3097 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 TRIP11Q15643 1979 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 C5orf42Q9H799 3197 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 SF3B1O75533 1304 aaKnown RBP eCLIP3.76□□□□□ -1.812e-6■■■■■ 59.2
UBE2D3-226ENST00000508635 PHLPP2Q6ZVD8 1323 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 MYH15Q9Y2K3 1946 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 SMIM28A0A1B0GU29 152 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 VPS37CA5D8V6 355 aaPredicted RBP3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 CASTOR2A6NHX0 329 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 VWC2LB2RUY7 222 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 TMEM189-UBE2V1I3L0A0 370 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 MYO1FO00160 1098 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 PPM1DO15297 605 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 SLC16A4O15374 487 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 PPP6R2O75170 966 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 TADA2AO75478 443 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 SOAT2O75908 522 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 YEATS4O95619 227 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 GLUD1P00367 558 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 THP07101 528 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 ATXN1LP0C7T5 689 aaKnown RBP3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 PLA2G4BP0C869 781 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 MCF2P10911 925 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 MYF5P13349 255 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 RPL17P18621 184 aaKnown RBP3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 CXCR5P32302 372 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 LONP1P36776 959 aaKnown RBP3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 FOLR3P41439 243 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 CLCNKBP51801 687 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 SLC12A3P55017 1021 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 FAM193AP78312 1265 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 FMO1Q01740 532 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 ELAVL2Q12926 359 aaKnown RBP3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 DMP1Q13316 513 aaPredicted RBP3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 BECN1Q14457 450 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 ZRSR1Q15695 479 aaKnown RBP3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 CNGA2Q16280 664 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 UPP1Q16831 310 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 USP41Q3LFD5 358 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 DCAF4L1Q3SXM0 396 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 TMEM119Q4V9L6 283 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 XKR4Q5GH76 650 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 DCAF12L1Q5VU92 463 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 FAM171A1Q5VUB5 890 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 KAZNQ674X7 775 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 FUT10Q6P4F1 479 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 DCLRE1AQ6PJP8 1040 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 PCSK4Q6UW60 755 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 PRSS55Q6UWB4 352 aaPredicted RBP3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 ALKAL1Q6UXT8 129 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 CYP26C1Q6V0L0 522 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 C15orf39Q6ZRI6 1047 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 USP49Q70CQ1 688 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 PALB2Q86YC2 1186 aa3.76□□□□□ -1.81
UBE2D3-226ENST00000508635 TMEM161BQ8NDZ6 487 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms