RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 ARSIQ5FYB1 569 aa17.61■□□□□ 0.41
RNF4-209ENST00000507784 TMEM196Q5HYL7 178 aa17.61■□□□□ 0.41
RNF4-209ENST00000507784 SDE2Q6IQ49 451 aa17.61■□□□□ 0.41
RNF4-209ENST00000507784 TRMT10CQ7L0Y3 403 aaKnown RBP17.61■□□□□ 0.41
RNF4-209ENST00000507784 STK40Q8N2I9 435 aa17.61■□□□□ 0.41
RNF4-209ENST00000507784 UHMK1Q8TAS1 419 aaKnown RBP17.61■□□□□ 0.41
RNF4-209ENST00000507784 EZH1Q92800 747 aaPredicted RBP17.61■□□□□ 0.41
RNF4-209ENST00000507784 STAMBPL1Q96FJ0 436 aa17.61■□□□□ 0.41
RNF4-209ENST00000507784 TUBGCP5Q96RT8 1024 aa17.61■□□□□ 0.41
RNF4-209ENST00000507784 ADGRE3Q9BY15 652 aa17.61■□□□□ 0.41
RNF4-209ENST00000507784 TXLNGYQ9BZA5 131 aa17.61■□□□□ 0.41
RNF4-209ENST00000507784 CPEB1Q9BZB8 566 aaKnown RBP17.61■□□□□ 0.41
RNF4-209ENST00000507784 PHACTR1Q9C0D0 580 aa17.61■□□□□ 0.41
RNF4-209ENST00000507784 SUV39H2Q9H5I1 410 aa17.61■□□□□ 0.41
RNF4-209ENST00000507784 VPS37BQ9H9H4 285 aa17.61■□□□□ 0.41
RNF4-209ENST00000507784 IL36AQ9UHA7 158 aa17.61■□□□□ 0.41
RNF4-209ENST00000507784 NDRG2Q9UN36 371 aaKnown RBP17.61■□□□□ 0.41
RNF4-209ENST00000507784 SORCS3Q9UPU3 1222 aa17.61■□□□□ 0.41
RNF4-209ENST00000507784 PCDHB9Q9Y5E1 797 aa17.61■□□□□ 0.41
RNF4-209ENST00000507784 MUC22E2RYF6 1773 aaPredicted RBP17.61■□□□□ 0.41
RNF4-209ENST00000507784 MAN2B1O00754 1011 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 ACSL3O95573 720 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 UGT2B4P06133 528 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 ATXN1LP0C7T5 689 aaKnown RBP17.6■□□□□ 0.41
RNF4-209ENST00000507784 CD72P21854 359 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 HSD17B3P37058 310 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 MAGEA3P43357 314 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 POU6F1Q14863 301 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 GDPD4Q6W3E5 623 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 HDXQ7Z353 690 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 IGDCC3Q8IVU1 814 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 AGGF1Q8N302 714 aaeCLIP17.6■□□□□ 0.41
RNF4-209ENST00000507784 PPHLN1Q8NEY8 458 aaKnown RBP17.6■□□□□ 0.41
RNF4-209ENST00000507784 OR8D1Q8WZ84 308 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 LRRC39Q96DD0 335 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 TTC25Q96NG3 672 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 KLHL32Q96NJ5 620 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 TRIB3Q96RU7 358 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 EBNA1BP2Q99848 306 aaKnown RBP17.6■□□□□ 0.41
RNF4-209ENST00000507784 TMEM245Q9H330 911 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 ARNT2Q9HBZ2 717 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 ZC3H7BQ9UGR2 993 aaKnown RBP17.6■□□□□ 0.41
RNF4-209ENST00000507784 FBXL21Q9UKT6 434 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 TEX264Q9Y6I9 313 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 ATG2BQ96BY7 2078 aa17.6■□□□□ 0.41
RNF4-209ENST00000507784 MYLKQ15746 1914 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 CCDC78A2IDD5 438 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 NPC1O15118 1278 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 SOCS5O75159 536 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 LEFTY1O75610 366 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 PGLSO95336 258 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 KLF8O95600 359 aaPredicted RBP17.59■□□□□ 0.41
RNF4-209ENST00000507784 PRLP01236 227 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 PIRTP0C851 137 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 ALADP13716 330 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 CTPS1P17812 591 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 SLC8A1P32418 973 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 KIR2DL1P43626 348 aaPredicted RBP17.59■□□□□ 0.41
RNF4-209ENST00000507784 CASP8Q14790 479 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 PCID2Q5JVF3 399 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 C9orf64Q5T6V5 341 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 RELL1Q8IUW5 271 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 MREGQ8N565 214 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 BLOC1S5Q8TDH9 187 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 IL22Q9GZX6 179 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 WASF2Q9Y6W5 498 aa17.59■□□□□ 0.41
RNF4-209ENST00000507784 SZT2Q5T011 3432 aa17.58■□□□□ 0.41
RNF4-209ENST00000507784 C19orf67A6NJJ6 358 aa17.58■□□□□ 0.4
RNF4-209ENST00000507784 RIPK2O43353 540 aa17.58■□□□□ 0.4
RNF4-209ENST00000507784 HTRA2O43464 458 aaPredicted RBP17.58■□□□□ 0.4
RNF4-209ENST00000507784 FZD6O60353 706 aa17.58■□□□□ 0.4
RNF4-209ENST00000507784 SYNCRIPO60506 623 aaKnown RBP17.58■□□□□ 0.4
RNF4-209ENST00000507784 TTC4O95801 387 aa17.58■□□□□ 0.4
RNF4-209ENST00000507784 SSTR1P30872 391 aa17.58■□□□□ 0.4
RNF4-209ENST00000507784 ABL2P42684 1182 aa17.58■□□□□ 0.4
RNF4-209ENST00000507784 QPCTQ16769 361 aa17.58■□□□□ 0.4
RNF4-209ENST00000507784 UBAP2Q5T6F2 1119 aaKnown RBP17.58■□□□□ 0.4
RNF4-209ENST00000507784 CES3Q6UWW8 571 aa17.58■□□□□ 0.4
RNF4-209ENST00000507784 ZNF852Q6ZMS4 543 aa17.58■□□□□ 0.4
RNF4-209ENST00000507784 NDUFAF2Q8N183 169 aa17.58■□□□□ 0.4
RNF4-209ENST00000507784 ATXN2LQ8WWM7 1075 aaKnown RBP17.58■□□□□ 0.4
RNF4-209ENST00000507784 ZNF641Q96N77 438 aaPredicted RBP17.58■□□□□ 0.4
RNF4-209ENST00000507784 WDR83Q9BRX9 315 aaKnown RBP17.58■□□□□ 0.4
RNF4-209ENST00000507784 PABPC3Q9H361 631 aaKnown RBP17.58■□□□□ 0.4
RNF4-209ENST00000507784 PRSS16Q9NQE7 514 aa17.58■□□□□ 0.4
RNF4-209ENST00000507784 MAGEB16A2A368 324 aa17.57■□□□□ 0.4
RNF4-209ENST00000507784 ANKRD66B4E2M5 251 aa17.57■□□□□ 0.4
RNF4-209ENST00000507784 TRAFD1O14545 582 aaPredicted RBP17.57■□□□□ 0.4
RNF4-209ENST00000507784 PRNPP04156 253 aa17.57■□□□□ 0.4
RNF4-209ENST00000507784 PRKCGP05129 697 aa17.57■□□□□ 0.4
RNF4-209ENST00000507784 CTSLP07711 333 aa17.57■□□□□ 0.4
RNF4-209ENST00000507784 PGAM1P18669 254 aa17.57■□□□□ 0.4
RNF4-209ENST00000507784 XPAP23025 273 aaPredicted RBP17.57■□□□□ 0.4
RNF4-209ENST00000507784 ADRA1DP25100 572 aa17.57■□□□□ 0.4
RNF4-209ENST00000507784 NTSR1P30989 418 aa17.57■□□□□ 0.4
RNF4-209ENST00000507784 PHBP35232 272 aa17.57■□□□□ 0.4
RNF4-209ENST00000507784 CBLBQ13191 982 aa17.57■□□□□ 0.4
RNF4-209ENST00000507784 SLC29A2Q14542 456 aa17.57■□□□□ 0.4
RNF4-209ENST00000507784 UAP1Q16222 522 aaPredicted RBP17.57■□□□□ 0.4
RNF4-209ENST00000507784 POM121L1PQ3SYA9 428 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms