RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 APOBEC3BQ9UH17 382 aaKnown RBP5.93□□□□□ -1.46
GYPB-205ENST00000505583 IPO11Q9UI26 975 aaKnown RBP5.93□□□□□ -1.46
GYPB-205ENST00000505583 NOCTQ9UK39 431 aaKnown RBP5.93□□□□□ -1.46
GYPB-205ENST00000505583 COQ6Q9Y2Z9 468 aa5.93□□□□□ -1.46
GYPB-205ENST00000505583 A0A1W2PQM1 296 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 C2CD4BA6NLJ0 364 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 B8ZZF3 427 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 F8VZ95 297 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 NTN3O00634 580 aaPredicted RBP5.92□□□□□ -1.46
GYPB-205ENST00000505583 KDELR3O43731 214 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 NOBOXO60393 691 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 TMCC1O94876 653 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 PIGNO95427 931 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 POP4O95707 220 aaKnown RBP5.92□□□□□ -1.46
GYPB-205ENST00000505583 GSRP00390 522 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 PRKCGP05129 697 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 UCHL3P15374 230 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 RHOQP17081 205 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 RBMS1P29558 406 aaKnown RBP5.92□□□□□ -1.46
GYPB-205ENST00000505583 EIF4A3P38919 411 aaKnown RBP5.92□□□□□ -1.46
GYPB-205ENST00000505583 THOP1P52888 689 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 UCNP55089 124 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 SNX16P57768 344 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 BPIFB4P59827 614 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 FMO1Q01740 532 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 NRG1Q02297 640 aaPredicted RBP5.92□□□□□ -1.46
GYPB-205ENST00000505583 PTP4A2Q12974 167 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 IRF4Q15306 451 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 ALG11Q2TAA5 492 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 KLHL40Q2TBA0 621 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 WSCD2Q2TBF2 565 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 FAXCQ5TGI0 409 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 BROXQ5VW32 411 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 GDPD4Q6W3E5 623 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 ARCQ7LC44 396 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 CLEC14AQ86T13 490 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 ZSWIM9Q86XI8 627 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 EXD3Q8N9H8 876 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 MLKLQ8NB16 471 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 DENND6BQ8NEG7 585 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 WDR36Q8NI36 951 aaKnown RBP5.92□□□□□ -1.46
GYPB-205ENST00000505583 PCDH19Q8TAB3 1148 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 PRR7Q8TB68 274 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 CENPIQ92674 756 aaPredicted RBP5.92□□□□□ -1.46
GYPB-205ENST00000505583 RAB7BQ96AH8 199 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 WBP1Q96G27 269 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 C11orf70Q9BRQ4 267 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 TUBGCP2Q9BSJ2 902 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 DPH1Q9BZG8 443 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 TTYH3Q9C0H2 523 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 SYNDIG1Q9H7V2 258 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 SAMSN1Q9NSI8 373 aaKnown RBP5.92□□□□□ -1.46
GYPB-205ENST00000505583 TMEM248Q9NWD8 314 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 SPASTQ9UBP0 616 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 GULP1Q9UBP9 304 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 LHX3Q9UBR4 397 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 TSR3Q9UJK0 312 aaKnown RBP5.92□□□□□ -1.46
GYPB-205ENST00000505583 PADI4Q9UM07 663 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 OR1A2Q9Y585 309 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 PAXBP1Q9Y5B6 917 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 PCDHGA8Q9Y5G5 932 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 COL6A6A6NMZ7 2263 aa5.92□□□□□ -1.46
GYPB-205ENST00000505583 CCDC187A0A096LP49 1063 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 BUB1O43683 1085 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 BUB1BO60566 1050 aaPredicted RBP5.91□□□□□ -1.46
GYPB-205ENST00000505583 RAMP2O60895 175 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 TCEA3O75764 348 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 TM7SF2O76062 418 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 GFPT2O94808 682 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 LSM8O95777 96 aaKnown RBP5.91□□□□□ -1.46
GYPB-205ENST00000505583 CYP1A1P04798 512 aaPredicted RBP5.91□□□□□ -1.46
GYPB-205ENST00000505583 ANXA6P08133 673 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 PLEKP08567 350 aaPredicted RBP5.91□□□□□ -1.46
GYPB-205ENST00000505583 C6P13671 934 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 WT1P19544 449 aaPredicted RBP5.91□□□□□ -1.46
GYPB-205ENST00000505583 ITIH1P19827 911 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 MMP8P22894 467 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 SLC5A2P31639 672 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 RFC1P35251 1148 aaPredicted RBP5.91□□□□□ -1.46
GYPB-205ENST00000505583 PTPN9P43378 593 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 RGRP47804 291 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 MAPKAPK2P49137 400 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 HK3P52790 923 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 SNRPD1P62314 119 aaKnown RBP5.91□□□□□ -1.46
GYPB-205ENST00000505583 YPEL5P62699 121 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 CCL7P80098 99 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 NFKB2Q00653 900 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 PPARDQ03181 441 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 SPIDRQ14159 915 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 INPP5AQ14642 412 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 POLD3Q15054 466 aaPredicted RBP5.91□□□□□ -1.46
GYPB-205ENST00000505583 NR6A1Q15406 480 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 CYTH1Q15438 398 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 ZSCAN23Q3MJ62 389 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 ARL13BQ3SXY8 428 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 LINC00303Q3SY05 128 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 TMEM52BQ4KMG9 183 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 ACBD5Q5T8D3 534 aaPredicted RBP5.91□□□□□ -1.46
GYPB-205ENST00000505583 BLOC1S3Q6QNY0 202 aa5.91□□□□□ -1.46
GYPB-205ENST00000505583 MACC1Q6ZN28 852 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms