RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 CCDC3Q9BQI4 270 aa11.24□□□□□ -0.61
UBE2D3-219ENST00000505207 SYNDIG1Q9H7V2 258 aa11.24□□□□□ -0.61
UBE2D3-219ENST00000505207 CPNE5Q9HCH3 593 aa11.24□□□□□ -0.61
UBE2D3-219ENST00000505207 FAM207AQ9NSI2 230 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-219ENST00000505207 SAMSN1Q9NSI8 373 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-219ENST00000505207 NDFIP2Q9NV92 336 aa11.24□□□□□ -0.61
UBE2D3-219ENST00000505207 TAB2Q9NYJ8 693 aa11.24□□□□□ -0.61
UBE2D3-219ENST00000505207 CHMP5Q9NZZ3 219 aa11.24□□□□□ -0.61
UBE2D3-219ENST00000505207 GULP1Q9UBP9 304 aa11.24□□□□□ -0.61
UBE2D3-219ENST00000505207 ITM2BQ9Y287 266 aa11.24□□□□□ -0.61
UBE2D3-219ENST00000505207 ENTPD2Q9Y5L3 495 aa11.24□□□□□ -0.61
UBE2D3-219ENST00000505207 ACTL7AQ9Y615 435 aa11.24□□□□□ -0.61
UBE2D3-219ENST00000505207 DOCK4Q8N1I0 1966 aa11.24□□□□□ -0.61
UBE2D3-219ENST00000505207 SIGLEC16A6NMB1 481 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 FAM72CH0Y354 149 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 J3QKU1 62 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 FGF10O15520 208 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 GCATO75600 419 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 TNFSF15O95150 251 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 PLA2G2AP14555 144 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 RFC1P35251 1148 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 IGFALSP35858 605 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 HK3P52790 923 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 HDAC4P56524 1084 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 FMO1Q01740 532 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 FAM72AQ5TYM5 149 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 FAM72DQ6L9T8 149 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 PPP1R2P3Q6NXS1 205 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 BRAT1Q6PJG6 821 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 CCDC81Q6ZN84 652 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 FAM72BQ86X60 149 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 DNAAF5Q86Y56 855 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 PHF13Q86YI8 300 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 HID1Q8IV36 788 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 RBFAQ8N0V3 343 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 PAF1Q8N7H5 531 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 TP53I13Q8NBR0 393 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 C3orf20Q8ND61 904 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 NEK11Q8NG66 645 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 JOSD2Q8TAC2 188 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 ENOX1Q8TC92 643 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 TMEM74Q96NL1 305 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 GFM1Q96RP9 751 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 WRAP53Q9BUR4 548 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 LRRC61Q9BV99 259 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 EDEM3Q9BZQ6 932 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 VPS16Q9H269 839 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 GANQ9H2C0 597 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 SUV39H2Q9H5I1 410 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 SEPT11Q9NVA2 429 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 UBA2Q9UBT2 640 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 GGT7Q9UJ14 662 aa11.23□□□□□ -0.61
UBE2D3-219ENST00000505207 KALRNO60229 2985 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 CFAP69A5D8W1 941 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 WASH4PA8MWX3 477 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 CDRT15L2A8MXV6 281 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 EIF3CLB5ME19 914 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 RASA4BC9J798 803 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 K7ENP7 123 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 RASA4O43374 803 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 CREB3O43889 395 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 FLNBO75369 2602 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 TNFP01375 233 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 ITGA2BP08514 1039 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 UNGP13051 313 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 CHRNB2P17787 502 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 KELP23276 732 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 ZNF143P52747 638 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 NDST2P52849 883 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 POLR2LP62875 67 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 SERINC3Q13530 473 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 NFATC4Q14934 902 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 IRF4Q15306 451 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 UGP2Q16851 508 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 CLEC16AQ2KHT3 1053 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 PERM1Q5SV97 790 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 TPRG1LQ5T0D9 272 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 DNAJC24Q6P3W2 148 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 DCUN1D2Q6PH85 259 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 INO80CQ6PI98 192 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 WDR59Q6PJI9 974 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 CRTC1Q6UUV9 634 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 ENPP7Q6UWV6 458 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 XKR5Q6UX68 686 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 RD3Q7Z3Z2 195 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 CLEC14AQ86T13 490 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 UMODL1-AS1Q8N2C9 162 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 FBXO39Q8N4B4 442 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 CCDC185Q8N715 623 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 EFCAB3Q8N7B9 438 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 TMEM159Q96B96 161 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 HMCESQ96FZ2 354 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 LIN37Q96GY3 246 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 TUBGCP5Q96RT8 1024 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 EIF3CQ99613 913 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 CNPY3Q9BT09 278 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 APOOQ9BUR5 198 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 TCEAL2Q9H3H9 227 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 NLRC4Q9NPP4 1024 aa11.22□□□□□ -0.61
UBE2D3-219ENST00000505207 MBNL1Q9NR56 388 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms