RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 FAM76AQ8TAV0 307 aa10.24□□□□□ -0.77
DDX41-203ENST00000504781 EPS8L3Q8TE67 593 aaKnown RBP10.24□□□□□ -0.77
DDX41-203ENST00000504781 BHMTQ93088 406 aa10.24□□□□□ -0.77
DDX41-203ENST00000504781 MTBPQ96DY7 904 aa10.24□□□□□ -0.77
DDX41-203ENST00000504781 TUBGCP5Q96RT8 1024 aa10.24□□□□□ -0.77
DDX41-203ENST00000504781 PLAC1Q9HBJ0 212 aa10.24□□□□□ -0.77
DDX41-203ENST00000504781 NSMCE4AQ9NXX6 385 aa10.24□□□□□ -0.77
DDX41-203ENST00000504781 PSMC3IPQ9P2W1 217 aaPredicted RBP10.24□□□□□ -0.77
DDX41-203ENST00000504781 LHX3Q9UBR4 397 aa10.24□□□□□ -0.77
DDX41-203ENST00000504781 SLC25A13Q9UJS0 675 aa10.24□□□□□ -0.77
DDX41-203ENST00000504781 ADAM21Q9UKJ8 722 aa10.24□□□□□ -0.77
DDX41-203ENST00000504781 C2orf16Q68DN1 1984 aa10.24□□□□□ -0.77
DDX41-203ENST00000504781 MYOFQ9NZM1 2061 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 ZCWPW2A0A1B0GU75 182 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 MROH6A6NGR9 719 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 ANKRD66B4E2M5 251 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 POLR3GO15318 223 aaPredicted RBP10.23□□□□□ -0.77
DDX41-203ENST00000504781 ECI2O75521 394 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 KRT37O76014 449 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 CRTAMO95727 393 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 PRLP01236 227 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 INHBAP08476 426 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 SNRPAP09012 282 aaKnown RBP10.23□□□□□ -0.77
DDX41-203ENST00000504781 PSMC3P17980 439 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 SP100P23497 879 aaPredicted RBP10.23□□□□□ -0.77
DDX41-203ENST00000504781 PSMA3P25788 255 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 SLCO1A2P46721 670 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 DGKGP49619 791 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 SLC18A1P54219 525 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 MAGOHP61326 146 aaKnown RBP10.23□□□□□ -0.77
DDX41-203ENST00000504781 CRADDP78560 199 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 PDE1BQ01064 536 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 MTM1Q13496 603 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 RUNX3Q13761 415 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 CRYMQ14894 314 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 PCSK7Q16549 785 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 SKIDA1Q1XH10 827 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 MYLK3Q32MK0 819 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 GRTP1Q5TC63 336 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 KCTD16Q68DU8 428 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 PDPK2PQ6A1A2 396 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 ASTLQ6HA08 431 aaPredicted RBP10.23□□□□□ -0.77
DDX41-203ENST00000504781 CAPN12Q6ZSI9 719 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 NUDT18Q6ZVK8 323 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 MTSS1LQ765P7 747 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 MARK2Q7KZI7 788 aaKnown RBP10.23□□□□□ -0.77
DDX41-203ENST00000504781 GET4Q7L5D6 327 aaPredicted RBP10.23□□□□□ -0.77
DDX41-203ENST00000504781 KDELC2Q7Z4H8 507 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 ADIPOR2Q86V24 386 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 EXOC3L1Q86VI1 746 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 LMNTD2Q8IXW0 634 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 YAF2Q8IY57 180 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 KDM1BQ8NB78 822 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 DCAKDQ8WVC6 231 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 ALKBH8Q96BT7 664 aaKnown RBP10.23□□□□□ -0.77
DDX41-203ENST00000504781 RSPRY1Q96DX4 576 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 ZNF641Q96N77 438 aaPredicted RBP10.23□□□□□ -0.77
DDX41-203ENST00000504781 FCRL3Q96P31 734 aaPredicted RBP10.23□□□□□ -0.77
DDX41-203ENST00000504781 TRIB3Q96RU7 358 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 APOL2Q9BQE5 337 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 ECT2Q9H8V3 914 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 CNOT10Q9H9A5 744 aaKnown RBP10.23□□□□□ -0.77
DDX41-203ENST00000504781 SSU72Q9NP77 194 aaKnown RBP10.23□□□□□ -0.77
DDX41-203ENST00000504781 HACD3Q9P035 362 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 ERVW-1Q9UQF0 538 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 TCAF1Q9Y4C2 921 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 RAI2Q9Y5P3 530 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 ACTL7AQ9Y615 435 aa10.23□□□□□ -0.77
DDX41-203ENST00000504781 SMIM23A6NLE4 172 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 SLC7A4O43246 635 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 HTRA2O43464 458 aaPredicted RBP10.22□□□□□ -0.77
DDX41-203ENST00000504781 FZD6O60353 706 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 SOCS5O75159 536 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 SIN3BO75182 1162 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 ZNF821O75541 412 aaPredicted RBP10.22□□□□□ -0.77
DDX41-203ENST00000504781 KRT38O76015 456 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 IGSF6O95976 241 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 GSRP00390 522 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 CYP17A1P05093 508 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 ATXN1LP0C7T5 689 aaKnown RBP10.22□□□□□ -0.77
DDX41-203ENST00000504781 SRCP12931 536 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 NR1D1P20393 614 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 FCARP24071 287 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 HADHAP40939 763 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 EIF2DP41214 584 aaKnown RBP10.22□□□□□ -0.77
DDX41-203ENST00000504781 RGRP47804 291 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 POLD2P49005 469 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 PPP2R2AP63151 447 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 BCL2L1Q07817 233 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 OLIG2Q13516 323 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 DLG2Q15700 870 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 CARD16Q5EG05 197 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 DGKKQ5KSL6 1271 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 TSTD2Q5T7W7 516 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 TEDDM1Q5T9Z0 273 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 MBLAC2Q68D91 279 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 VITQ6UXI7 678 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 KDM7AQ6ZMT4 941 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 TIFABQ6ZNK6 161 aa10.22□□□□□ -0.77
DDX41-203ENST00000504781 CTAGE3PQ8IX95 158 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms