RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 HAPLN3Q96S86 360 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 WRAP53Q9BUR4 548 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 APOOQ9BUR5 198 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 PIGVQ9NUD9 493 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 CNTN6Q9UQ52 1028 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 IGLV3-10A0A075B6K4 115 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 B4DGG1 531 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 NKX2-8O15522 239 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 ZW10O43264 779 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 RAD1O60671 282 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 DAB1O75553 588 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 POP4O95707 220 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 KRT7P08729 469 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 ZSCAN22P10073 491 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 PRKAR1AP10644 381 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 GNA15P30679 374 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 CXCR3P49682 368 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 SNRPD1P62314 119 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 B4GALNT1Q00973 533 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 GNA12Q03113 381 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 CLPPQ16740 277 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 AMZ1Q400G9 498 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 ANKRD40Q6AI12 368 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 C11orf57Q6ZUT1 292 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 OR2AP1Q8NGE2 309 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 KIAA1143Q96AT1 154 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 C1orf74Q96LT6 269 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 WDR92Q96MX6 357 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 CPXM1Q96SM3 734 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 DPEP2Q9H4A9 486 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 ANLNQ9NQW6 1124 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 RRN3Q9NYV6 651 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 B3GALT1Q9Y5Z6 326 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 ACTL7AQ9Y615 435 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 DGKBQ9Y6T7 804 aa15.98■□□□□ 0.15
PDLIM7-210ENST00000503827 CXorf51AA0A1B0GTR3 108 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 P4HA2O15460 535 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 SRGAP2O75044 1071 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 VPS4BO75351 444 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 CD160O95971 181 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 GSRP00390 522 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 PRCPP42785 496 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 NDUFA8P51970 172 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 MLLT10P55197 1068 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 GEMIN4P57678 1058 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 DNM1Q05193 864 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 CDC20Q12834 499 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 INPP5AQ14642 412 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 WSCD2Q2TBF2 565 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 MYLK3Q32MK0 819 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 GDPD4Q6W3E5 623 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 FAM183BPQ6ZVS7 135 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 IRF2BP1Q8IU81 584 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 TEX19Q8NA77 164 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 SSC4DQ8WTU2 575 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 ART4Q93070 314 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 PMEPA1Q969W9 287 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 PDXPQ96GD0 296 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 KREMEN1Q96MU8 473 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 EFHD1Q9BUP0 239 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 DDA1Q9BW61 102 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 ASPSCR1Q9BZE9 553 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 GPN2Q9H9Y4 310 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 VPS4AQ9UN37 437 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 OR1A2Q9Y585 309 aa15.97■□□□□ 0.15
PDLIM7-210ENST00000503827 IGHV5-10-1A0A0J9YXX1 117 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 I6L893 689 aaPredicted RBP15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 K7ELQ4 463 aaPredicted RBP15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 B4GAT1O43505 415 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 DUX1O43812 170 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 F9P00740 461 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 ITIH2P19823 946 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 ETFBP38117 255 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 TRA2AQ13595 282 aaKnown RBP eCLIP15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 ARHGAP44Q17R89 818 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 DEFB109BQ30KR1 87 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 SPECC1LQ69YQ0 1117 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 KRBA2Q6ZNG9 492 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 NYAP1Q6ZVC0 841 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 SFTPA2Q8IWL1 248 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 DRC7Q8IY82 874 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 EHBP1Q8NDI1 1231 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 AGBL5Q8NDL9 886 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 KIAA1524Q8TCG1 905 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 CCDC74BQ96LY2 380 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 NPY6RQ99463 290 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 NUDT22Q9BRQ3 303 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 GTPBP4Q9BZE4 634 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 ZYG11BQ9C0D3 744 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 SLC39A1Q9NY26 324 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 STAP1Q9ULZ2 295 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 TP53TG5Q9Y2B4 290 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 COQ6Q9Y2Z9 468 aa15.96■□□□□ 0.15
PDLIM7-210ENST00000503827 ITPR2Q14571 2701 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 RHPN2P1A8MT19 583 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 XPAP23025 273 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 ALDH4A1P30038 563 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 CSTF2P33240 577 aaKnown RBP eCLIP15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 UQCRFS1P47985 274 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 SULT1E1P49888 294 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms