RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 PCDH12Q9NPG4 1184 aa19.63■□□□□ 0.73
UBE2D3-215ENST00000503418 MBNL1Q9NR56 388 aaKnown RBP19.63■□□□□ 0.73
UBE2D3-215ENST00000503418 CWC15Q9P013 229 aaKnown RBP19.63■□□□□ 0.73
UBE2D3-215ENST00000503418 CLCA2Q9UQC9 943 aa19.63■□□□□ 0.73
UBE2D3-215ENST00000503418 AK5Q9Y6K8 562 aa19.63■□□□□ 0.73
UBE2D3-215ENST00000503418 DSPP15924 2871 aaKnown RBP19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 A0A1W2PQJ5 194 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 GOLGA6L19H0YKK7 550 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 AQP9O43315 295 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 BUB1BO60566 1050 aaPredicted RBP19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 PRKCGP05129 697 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 PCK1P35558 622 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 RGRP47804 291 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 SUOXP51687 545 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 EIF2B5Q13144 721 aaKnown RBP19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 IRF4Q15306 451 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 UGP2Q16851 508 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 TMEM52BQ4KMG9 183 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 AFMIDQ63HM1 303 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 HGSNATQ68CP4 663 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 ERAP2Q6P179 960 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 SRLQ86TD4 932 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 CAMK1DQ8IU85 385 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 RBFAQ8N0V3 343 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 HCAR2Q8TDS4 363 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 HNRNPLLQ8WVV9 542 aaKnown RBP19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 HSPH1Q92598 858 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 ZNF641Q96N77 438 aaPredicted RBP19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 TUBGCP5Q96RT8 1024 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 ATP13A3Q9H7F0 1226 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 EVA1BQ9NVM1 165 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 APOBEC3BQ9UH17 382 aaKnown RBP19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 BZW2Q9Y6E2 419 aaKnown RBP19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 LAMA5O15230 3695 aa19.62■□□□□ 0.73
UBE2D3-215ENST00000503418 TSPAN11A1L157 253 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 H3BRJ5 948 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 C6P13671 934 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 TCF4P15884 667 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 IL1R2P27930 398 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 SERPINA4P29622 427 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 PBX1P40424 430 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 ARL4AP40617 200 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 DUSP3P51452 185 aaPredicted RBP19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 ZNF135P52742 658 aaPredicted RBP19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 YPEL5P62699 121 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 SEMG2Q02383 582 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 IL10RBQ08334 325 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 DPYSQ14117 519 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 ACAP1Q15027 740 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 LRRC14Q15048 493 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 DEFB133Q30KQ1 61 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 ZCCHC8Q6NZY4 707 aaKnown RBP19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 BRAT1Q6PJG6 821 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 TP53INP2Q8IXH6 220 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 PHACTR4Q8IZ21 702 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 FAM181AQ8N9Y4 354 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 BTN2A2Q8WVV5 523 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 RFFLQ8WZ73 363 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 THAP2Q9H0W7 228 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 TCEAL2Q9H3H9 227 aaPredicted RBP19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 SPASTQ9UBP0 616 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 CSNK1G3Q9Y6M4 447 aa19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 URB1O60287 2271 aaKnown RBP19.61■□□□□ 0.73
UBE2D3-215ENST00000503418 LY6G6EA0A0G2JKS1 128 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 RIOK3O14730 519 aaKnown RBP19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 MT-CO3P00414 261 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 SERPING1P05155 500 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 EIF4A3P38919 411 aaKnown RBP19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 HCAR3P49019 387 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 ZBED6P86452 979 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 C1orf61Q13536 156 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 NFKBIBQ15653 356 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 DPYSL2Q16555 572 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 COL28A1Q2UY09 1125 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 PRRT3Q5FWE3 981 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 FAXCQ5TGI0 409 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 MACC1Q6ZN28 852 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 ZSWIM9Q86XI8 627 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 LZTR1Q8N653 840 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 SYN2Q92777 582 aaPredicted RBP19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 BTBD6Q96KE9 485 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 DCBLD2Q96PD2 775 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 IL12RB2Q99665 862 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 SLC13A1Q9BZW2 595 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 USP29Q9HBJ7 922 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 ANAPC7Q9UJX3 599 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 ATP8A1Q9Y2Q0 1164 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 U3KQA8 63 aa19.6■□□□□ 0.73
UBE2D3-215ENST00000503418 CELSR3Q9NYQ7 3312 aa19.59■□□□□ 0.73
UBE2D3-215ENST00000503418 TOR1BO14657 336 aa19.59■□□□□ 0.73
UBE2D3-215ENST00000503418 LZTS3O60299 673 aaPredicted RBP19.59■□□□□ 0.73
UBE2D3-215ENST00000503418 OPA1O60313 960 aa19.59■□□□□ 0.73
UBE2D3-215ENST00000503418 AMPD1P23109 780 aa19.59■□□□□ 0.73
UBE2D3-215ENST00000503418 MMP12P39900 470 aa19.59■□□□□ 0.73
UBE2D3-215ENST00000503418 CSNK1DP48730 415 aa19.59■□□□□ 0.73
UBE2D3-215ENST00000503418 LIG3P49916 1009 aa19.59■□□□□ 0.73
UBE2D3-215ENST00000503418 SCNN1BP51168 640 aa19.59■□□□□ 0.73
UBE2D3-215ENST00000503418 BCL2L1Q07817 233 aa19.59■□□□□ 0.73
UBE2D3-215ENST00000503418 PIGHQ14442 188 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms