RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 ALG3Q92685 438 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 SERAC1Q96JX3 654 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 IL12RB2Q99665 862 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 POLR1EQ9GZS1 481 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 TMEM9BQ9NQ34 198 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 RBM22Q9NW64 420 aaKnown RBP eCLIP18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 DLL3Q9NYJ7 618 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 CDV3Q9UKY7 258 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 ITM2BQ9Y287 266 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 CEP192Q8TEP8 1941 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 A0A1B0GVT2 93 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 A0A1W2PQ67 120 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 A0A1W2PR77 199 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 TTC24A2A3L6 582 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 UPK3BL1B0FP48 263 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 UPK3BL2E5RIL1 263 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 PRAMEF26H0Y7S4 382 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 SLC30A4O14863 429 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 WNT9AO14904 365 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 VILLO15195 856 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 PECAM1P16284 738 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 BNC1Q01954 994 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 ELP6Q0PNE2 266 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 UBE2Q2Q8WVN8 375 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 ASB12Q8WXK4 309 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 RMDN1Q96DB5 314 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 GGT7Q9UJ14 662 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 GUCA1BQ9UMX6 200 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 ATP8A1Q9Y2Q0 1164 aa18.39■□□□□ 0.53
PDLIM7-209ENST00000503346 KCNK1O00180 336 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 NEMP1O14524 444 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 DDX3YO15523 660 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 FTCDO95954 541 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 JCHAINP01591 159 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 HLA-DQB2P05538 268 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 ITIH2P19823 946 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 XPAP23025 273 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 CES1P23141 567 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 CD38P28907 300 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 ATXN3P54252 364 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 AP1B1Q10567 949 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 PRKD1Q15139 912 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 TMEM52BQ4KMG9 183 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 LRRC73Q5JTD7 316 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 IL27RAQ6UWB1 636 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 UBL4BQ8N7F7 174 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 TMEM145Q8NBT3 493 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 P3H4Q92791 437 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 KLK6Q92876 244 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 HES6Q96HZ4 224 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 SEMA3CQ99985 751 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 GTPBP2Q9BX10 602 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 C1QTNF2Q9BXJ5 285 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 HEMGNQ9BXL5 484 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 SLC17A9Q9BYT1 436 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 OSBPL8Q9BZF1 889 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 PCDH12Q9NPG4 1184 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 AASDHPPTQ9NRN7 309 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 SAE1Q9UBE0 346 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 ANKRD6Q9Y2G4 727 aa18.38■□□□□ 0.53
PDLIM7-209ENST00000503346 PCDH15Q96QU1 1955 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 C4orf47A7E2U8 309 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 RIOK3O14730 519 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 SLC31A1O15431 190 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 NEBLO76041 1014 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 WNT1P04628 370 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 PYGMP11217 842 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 PRLRP16471 622 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 HNRNPA2B1P22626 353 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 CETN2P41208 172 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 POLR2LP62875 67 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 ITKQ08881 620 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 TRAF2Q12933 501 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 ZBTB17Q13105 803 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 FGL2Q14314 439 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 KIF19Q2TAC6 998 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 SLC45A4Q5BKX6 768 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 ERAP2Q6P179 960 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 LAYNQ6UX15 382 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 ADAT2Q7Z6V5 191 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 IQCHQ86VS3 1027 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 MINDY1Q8N5J2 469 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 CNTD1Q8N815 330 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 MFSD2AQ8NA29 543 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 ARRDC2Q8TBH0 407 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 ANP32BQ92688 251 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 SKA1Q96BD8 255 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 HERPUD2Q9BSE4 406 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 RTKNQ9BST9 563 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 DNAAF2Q9NVR5 837 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 PACSIN2Q9UNF0 486 aaPredicted RBP18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 PCDHGC4Q9Y5F7 938 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 DMXL1Q9Y485 3027 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 RALGAPA1Q6GYQ0 2036 aa18.37■□□□□ 0.53
PDLIM7-209ENST00000503346 IGLON5A6NGN9 336 aa18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 APOC4-APOC2K7ER74 178 aa18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 APOC2P02655 101 aa18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 LAMA1P25391 3075 aa18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 AKT2P31751 481 aa18.36■□□□□ 0.53
PDLIM7-209ENST00000503346 MMP12P39900 470 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms