RNA–Protein interactions for RNA: ENST00000498524.5

ANKRD28-213, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 4,289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-213ENST00000498524 MRPL10Q7Z7H8 261 aaKnown RBP3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 RBM12BQ8IXT5 1001 aaKnown RBP3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 CEP70Q8NHQ1 597 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 TCP10LQ8TDR4 215 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 SHC3Q92529 594 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 CMTM5Q96DZ9 223 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 OXNAD1Q96HP4 312 aaPredicted RBP3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 APOPT1Q96IL0 206 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 VCPIP1Q96JH7 1222 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 KLF6Q99612 283 aaPredicted RBP3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 CDH19Q9H159 772 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 ELOVL2Q9NXB9 296 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 QPCTLQ9NXS2 382 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 KLK14Q9P0G3 267 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 NFKBIL1Q9UBC1 381 aaPredicted RBP3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 CHMP2BQ9UQN3 213 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 EFR3BQ9Y2G0 817 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 DNMT3AQ9Y6K1 912 aaPredicted RBP3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 LRRC37AA6NMS7 1700 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 E2F8A0AVK6 867 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 TMEM189-UBE2V1I3L0A0 370 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 PRPSAP2O60256 369 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 PEX11AO75192 247 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 TBX10O75333 385 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 SLITRK3O94933 977 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 CHRNA1P02708 482 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 SERPINB9P50453 376 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 EIF3EP60228 445 aaKnown RBP3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 OCRLQ01968 901 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 GHRHRQ02643 423 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 PTK2BQ14289 1009 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 GRM2Q14416 872 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 KCTD19Q17RG1 926 aaPredicted RBP3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 SLC35G1Q2M3R5 365 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 PLA2G4EQ3MJ16 856 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 GALNTL6Q49A17 601 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 DENND5BQ6ZUT9 1274 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 OTOAQ7RTW8 1153 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 GPR155Q7Z3F1 870 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 LRRC6Q86X45 466 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 TDRPQ86YL5 185 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 TRIML2Q8N7C3 387 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 FBXO36Q8NEA4 188 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 TRAPPC12Q8WVT3 735 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 TM9SF4Q92544 642 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 MFSD3Q96ES6 412 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 GORASP1Q9BQQ3 440 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 SARGQ9BW04 601 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 SLC13A1Q9BZW2 595 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 PHACTR1Q9C0D0 580 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 DENND2DQ9H6A0 471 aaPredicted RBP3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 SMYD2Q9NRG4 433 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 STX18Q9P2W9 335 aaKnown RBP3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 DNMT3LQ9UJW3 386 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 AGO2Q9UKV8 859 aaKnown RBP3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 ITGA11Q9UKX5 1188 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 CHKBQ9Y259 395 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 COMMD3-BMI1R4GMX3 469 aa3.98□□□□□ -1.77
ANKRD28-213ENST00000498524 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 C4orf47A7E2U8 309 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 KRT36O76013 467 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 SNX4O95219 450 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 TGDSO95455 350 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 WEE2P0C1S8 567 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 GSTT1P30711 240 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 NTSR1P30989 418 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 SLC18A1P54219 525 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 FMO1Q01740 532 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 C1QBPQ07021 282 aaKnown RBP3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 PPP3CAQ08209 521 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 LRRC36Q1X8D7 754 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 SETMARQ53H47 684 aaPredicted RBP3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 DCAF6Q58WW2 860 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 MDH1BQ5I0G3 518 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 EFHC1Q5JVL4 640 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 ZNF776Q68DI1 518 aaPredicted RBP3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 SCYL2Q6P3W7 929 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 MON1AQ86VX9 555 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 CBWD2Q8IUF1 395 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 CCDC60Q8IWA6 550 aaPredicted RBP3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 TBC1D21Q8IYX1 336 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 FAM26EQ8N5C1 309 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 ATP6V0D2Q8N8Y2 350 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 RFWD2Q8NHY2 731 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 TAS1R2Q8TE23 839 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 OR8D1Q8WZ84 308 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 AHCYL2Q96HN2 611 aaKnown RBP3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 MCEEQ96PE7 176 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 TRIM56Q9BRZ2 755 aaKnown RBP3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 NFKBIZQ9BYH8 718 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 SSU72Q9NP77 194 aaKnown RBP3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 MARCOQ9UEW3 520 aaPredicted RBP3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 ZC3H7BQ9UGR2 993 aaKnown RBP3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 CDH9Q9ULB4 789 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 SOX13Q9UN79 622 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 LRRC42Q9Y546 428 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 DOCK2Q92608 1830 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 TCRBV7S2A1N4TA0A589 114 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 WDR27A2RRH5 827 aa3.97□□□□□ -1.77
ANKRD28-213ENST00000498524 ARL5CA6NH57 179 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms