RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 DCCP43146 1447 aa5.13□□□□□ -1.59
SSR3-209ENST00000498205 RGPD8O14715 1765 aaPredicted RBP5.12□□□□□ -1.59
SSR3-209ENST00000498205 TCRBV7S3A2A0A539 114 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 HBP1O60381 514 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 TSPAN3O60637 253 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 SNHG28P0DPA3 235 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 FCGR2AP12318 317 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 HALP42357 657 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 PPFIA1Q13136 1202 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 CBWD5Q5RIA9 395 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 BEND3Q5T5X7 828 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 ASPHD1Q5U4P2 390 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 C9orf47Q6ZRZ4 202 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 G2E3Q7L622 706 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 C2CD5Q86YS7 1000 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 TMC8Q8IU68 726 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 ANKRD18AQ8IVF6 992 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 BRSK2Q8IWQ3 736 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 CSGALNACT1Q8TDX6 532 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 DNAAF4Q8WXU2 420 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 PYM1Q9BRP8 204 aaKnown RBP5.12□□□□□ -1.59
SSR3-209ENST00000498205 FRMD8Q9BZ67 464 aaPredicted RBP5.12□□□□□ -1.59
SSR3-209ENST00000498205 RBM38Q9H0Z9 239 aaKnown RBP5.12□□□□□ -1.59
SSR3-209ENST00000498205 EBF3Q9H4W6 596 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 MAP6D1Q9H9H5 199 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 HYPKQ9NX55 129 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 HMG20BQ9P0W2 317 aa5.12□□□□□ -1.59
SSR3-209ENST00000498205 DBF4Q9UBU7 674 aaPredicted RBP5.12□□□□□ -1.59
SSR3-209ENST00000498205 RPAP1Q9BWH6 1393 aaPredicted RBP5.12□□□□□ -1.59
SSR3-209ENST00000498205 PARP4Q9UKK3 1724 aaKnown RBP5.11□□□□□ -1.59
SSR3-209ENST00000498205 PROB1E7EW31 1015 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 NTN1O95631 604 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 MMP3P08254 477 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 CSF1P09603 554 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 UNGP13051 313 aaPredicted RBP5.11□□□□□ -1.59
SSR3-209ENST00000498205 MSNP26038 577 aaKnown RBP5.11□□□□□ -1.59
SSR3-209ENST00000498205 RFX2P48378 723 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 ENTPD1P49961 510 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 CLCNKBP51801 687 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 UBE2HP62256 183 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 ARHGAP8P85298 464 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 TBL3Q12788 808 aaKnown RBP5.11□□□□□ -1.59
SSR3-209ENST00000498205 BYSLQ13895 437 aaKnown RBP5.11□□□□□ -1.59
SSR3-209ENST00000498205 KRT24Q2M2I5 525 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 PLEKHO1Q53GL0 409 aaPredicted RBP5.11□□□□□ -1.59
SSR3-209ENST00000498205 ZNF484Q5JVG2 852 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 HMBOX1Q6NT76 420 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 FAM217AQ8IXS0 508 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 TMEM217Q8N7C4 229 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 C9orf106Q8NAJ2 232 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 KDM1BQ8NB78 822 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 LINS1Q8NG48 757 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 GABPB2Q8TAK5 448 aaPredicted RBP5.11□□□□□ -1.59
SSR3-209ENST00000498205 GPT2Q8TD30 523 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 C2CD4CQ8TF44 421 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 EVI5LQ96CN4 794 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 SF3B5Q9BWJ5 86 aaKnown RBP5.11□□□□□ -1.59
SSR3-209ENST00000498205 NPLQ9BXD5 320 aaPredicted RBP5.11□□□□□ -1.59
SSR3-209ENST00000498205 ARHGAP39Q9C0H5 1083 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 B3GNT4Q9C0J1 378 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 LSG1Q9H089 658 aaKnown RBP5.11□□□□□ -1.59
SSR3-209ENST00000498205 ISCUQ9H1K1 167 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 PDCL3Q9H2J4 239 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 KRCC1Q9NPI7 259 aaPredicted RBP5.11□□□□□ -1.59
SSR3-209ENST00000498205 HIF1ANQ9NWT6 349 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 CD207Q9UJ71 328 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 FEM1BQ9UK73 627 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 GDAQ9Y2T3 454 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 LRRFIP2Q9Y608 721 aaKnown RBP5.11□□□□□ -1.59
SSR3-209ENST00000498205 TRPM3Q9HCF6 1732 aaPredicted RBP5.11□□□□□ -1.59
SSR3-209ENST00000498205 SPEF2Q9C093 1822 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 EVPLQ92817 2033 aa5.11□□□□□ -1.59
SSR3-209ENST00000498205 RPS10-NUDT3A0A1W2PQS6 291 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 OR6C68A6NDL8 312 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 ADCY9O60503 1353 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 DDX58O95786 925 aaKnown RBP5.1□□□□□ -1.59
SSR3-209ENST00000498205 CNPP09543 421 aaKnown RBP5.1□□□□□ -1.59
SSR3-209ENST00000498205 ARSAP15289 507 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 ARSBP15848 533 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 PSMA5P28066 241 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 HMGN5P82970 282 aaKnown RBP5.1□□□□□ -1.59
SSR3-209ENST00000498205 ROR2Q01974 943 aaKnown RBP5.1□□□□□ -1.59
SSR3-209ENST00000498205 PPATQ06203 517 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 HNRNPA0Q13151 305 aaKnown RBP5.1□□□□□ -1.59
SSR3-209ENST00000498205 ZRSR2Q15696 482 aaKnown RBP5.1□□□□□ -1.59
SSR3-209ENST00000498205 LRRC24Q50LG9 513 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 CCDC183Q5T5S1 534 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 OTUD1Q5VV17 481 aaPredicted RBP5.1□□□□□ -1.59
SSR3-209ENST00000498205 ATL3Q6DD88 541 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 CAVIN1Q6NZI2 390 aaKnown RBP5.1□□□□□ -1.59
SSR3-209ENST00000498205 ZNF517Q6ZMY9 492 aaPredicted RBP5.1□□□□□ -1.59
SSR3-209ENST00000498205 PPP1R42Q7Z4L9 355 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 GLCCI1Q86VQ1 547 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 WDR5BQ86VZ2 330 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 HERC6Q8IVU3 1022 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 FBXL16Q8N461 479 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 ANKRD42Q8N9B4 389 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 SCAIQ8N9R8 606 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 CEP70Q8NHQ1 597 aa5.1□□□□□ -1.59
SSR3-209ENST00000498205 TMEM163Q8TC26 289 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms