RNA–Protein interactions for RNA: ENST00000498054.1

POLR1B-215, Transcript of RNA polymerase I subunit B, human

TSL 3

Gene POLR1B, Length 636 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1B-215	ENST00000498054	PIP5K1A	Q99755	562 aa		4.57	□□□□□ -1.68
POLR1B-215	ENST00000498054	EIF2B3	Q9NR50	452 aa	Known RBP	4.57	□□□□□ -1.68
POLR1B-215	ENST00000498054	C20orf141	Q9NUB4	165 aa		4.57	□□□□□ -1.68
POLR1B-215	ENST00000498054	SWAP70	Q9UH65	585 aa		4.57	□□□□□ -1.68
POLR1B-215	ENST00000498054	CLDN16	Q9Y5I7	305 aa		4.57	□□□□□ -1.68
POLR1B-215	ENST00000498054	COX11	Q9Y6N1	276 aa		4.57	□□□□□ -1.68
POLR1B-215	ENST00000498054	TMEM131L	A2VDJ0	1609 aa		4.57	□□□□□ -1.68
POLR1B-215	ENST00000498054	PTPN23	Q9H3S7	1636 aa		4.57	□□□□□ -1.68
POLR1B-215	ENST00000498054	NRXN3	Q9Y4C0	1643 aa		4.57	□□□□□ -1.68
POLR1B-215	ENST00000498054	ZFYVE9	O95405	1425 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	MST1R	Q04912	1400 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	CEP162	Q5TB80	1403 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	GOLGB1	Q14789	3259 aa	Known RBP	4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	MSH6	P52701	1360 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	TTC36	A6NLP5	189 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	EIF3CL	B5ME19	914 aa	Known RBP	4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054		F5H0A9	414 aa	Predicted RBP	4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	ADAM10	O14672	748 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	GFPT2	O94808	682 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	LATS1	O95835	1130 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	CLEC3B	P05452	202 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	LDHC	P07864	332 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	HOXD9	P28356	352 aa	Predicted RBP	4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	GNAQ	P50148	359 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	BLK	P51451	505 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	CLNS1A	P54105	237 aa	Known RBP	4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	INHBE	P58166	350 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	NHLH1	Q02575	133 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	MAMLD1	Q13495	774 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	SMTNL2	Q2TAL5	461 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	KRTAP15-1	Q3LI76	137 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	CFAP161	Q6P656	301 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	SLC46A3	Q7Z3Q1	461 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	UBE2Q1	Q7Z7E8	422 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	ANKRD13B	Q86YJ7	626 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	FAM217A	Q8IXS0	508 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	KIAA2013	Q8IYS2	634 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	HORMAD2	Q8N7B1	307 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	CADM4	Q8NFZ8	388 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	HDAC7	Q8WUI4	952 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	CLMN	Q96JQ2	1002 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	SEMA4C	Q9C0C4	833 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	NRIP3	Q9NQ35	241 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	THSD1	Q9NS62	852 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	HSPB7	Q9UBY9	170 aa		4.56	□□□□□ -1.68
POLR1B-215	ENST00000498054	DCC	P43146	1447 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	CCNB3	Q8WWL7	1395 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	KDM3A	Q9Y4C1	1321 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	TRBV5-3	A0A0A0MS03	114 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	TRBV5-7	A0A0A0MS05	114 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	C17orf102	A2RUQ5	167 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	LRRC53	A6NM62	1247 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	RNMT	O43148	476 aa	Known RBP	4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	ATP2C2	O75185	946 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	BCAR3	O75815	825 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	SEC31A	O94979	1220 aa	Known RBP	4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	CCNDBP1	O95273	360 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	IRF1	P10914	325 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	KEL	P23276	732 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	CPOX	P36551	454 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	CLCN5	P51795	746 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	RPL7A	P62424	266 aa	Known RBP	4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	KRTAP1-1	Q07627	177 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	GOLGA8DP	Q0D2H9	430 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	TMEM115	Q12893	351 aa	Predicted RBP	4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	EIF4A2	Q14240	407 aa	Known RBP	4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	DAZAP2	Q15038	168 aa	Predicted RBP	4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	MED22	Q15528	200 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	GSTA3	Q16772	222 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	ATG9B	Q674R7	924 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	CDC73	Q6P1J9	531 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	CPLX2	Q6PUV4	134 aa	Known RBP	4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	NEK10	Q6ZWH5	1172 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	KDELC2	Q7Z4H8	507 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	PXK	Q7Z7A4	578 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	TBC1D26	Q86UD7	250 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	TRIM74	Q86UV6	250 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	TRIM73	Q86UV7	250 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	SLC44A5	Q8NCS7	719 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	BBS4	Q96RK4	519 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	LHPP	Q9H008	270 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	BRF2	Q9HAW0	419 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	PNRC2	Q9NPJ4	139 aa	Known RBP	4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	HAUS2	Q9NVX0	235 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	FLRT1	Q9NZU1	646 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	LIMA1	Q9UHB6	759 aa	Known RBP	4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	AGO2	Q9UKV8	859 aa	Known RBP	4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	COG5	Q9UP83	839 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	GLI3	P10071	1580 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	TRPM2	O94759	1503 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	DUOX2	Q9NRD8	1548 aa		4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	TNS1	Q9HBL0	1735 aa	Known RBP	4.55	□□□□□ -1.68
POLR1B-215	ENST00000498054	IQGAP3	Q86VI3	1631 aa		4.54	□□□□□ -1.68
POLR1B-215	ENST00000498054	AFF2	P51816	1311 aa		4.54	□□□□□ -1.68
POLR1B-215	ENST00000498054	ZNF644	Q9H582	1327 aa	Predicted RBP	4.54	□□□□□ -1.68

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