RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 CAMK1DQ8IU85 385 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 RASGEF1CQ8N431 466 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 RYBPQ8N488 228 aaPredicted RBP12.03□□□□□ -0.48
APTX-233ENST00000496030 COG1Q8WTW3 980 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 TFB1MQ8WVM0 346 aaKnown RBP12.03□□□□□ -0.48
APTX-233ENST00000496030 NUDCD1Q96RS6 583 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 CEP41Q9BYV8 373 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 ZDHHC6Q9H6R6 413 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 NOD2Q9HC29 1040 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 NT5MQ9NPB1 228 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 FBXL12Q9NXK8 326 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 AMACRQ9UHK6 382 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 MSRB2Q9Y3D2 182 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 FARP1Q9Y4F1 1045 aaPredicted RBP12.03□□□□□ -0.48
APTX-233ENST00000496030 NAV2Q8IVL1 2488 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 KNL1Q8NG31 2342 aa12.03□□□□□ -0.48
APTX-233ENST00000496030 CEP192Q8TEP8 1941 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 A0A1W2PP55 124 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 TSPAN11A1L157 253 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 KPNA3O00505 521 aaPredicted RBP12.02□□□□□ -0.49
APTX-233ENST00000496030 TRAFD1O14545 582 aaPredicted RBP12.02□□□□□ -0.49
APTX-233ENST00000496030 SPINT1O43278 529 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 CEP104O60308 925 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 PIGNO95427 931 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 UGT2B4P06133 528 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 MMP2P08253 660 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 RBP3P10745 1247 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 ITGB7P26010 798 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 RBL1P28749 1068 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 CD6P30203 668 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 CD68P34810 354 aaPredicted RBP12.02□□□□□ -0.49
APTX-233ENST00000496030 SCNN1BP51168 640 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 EIF3EP60228 445 aaKnown RBP12.02□□□□□ -0.49
APTX-233ENST00000496030 DSC2Q02487 901 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 ZNF235Q14590 738 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 TEX44Q53QW1 395 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 ZNF805Q5CZA5 627 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 PIP5KL1Q5T9C9 394 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 SEL1L2Q5TEA6 688 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 CCDC181Q5TID7 509 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 AGBL4Q5VU57 503 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 FAM46CQ5VWP2 391 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 PAPD7Q5XG87 772 aaKnown RBP12.02□□□□□ -0.49
APTX-233ENST00000496030 GDPD4Q6W3E5 623 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.02□□□□□ -0.49
APTX-233ENST00000496030 ADAT2Q7Z6V5 191 aaKnown RBP12.02□□□□□ -0.49
APTX-233ENST00000496030 FAM124AQ86V42 546 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 PROSER1Q86XN7 944 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 HDDC3Q8N4P3 179 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 TTC13Q8NBP0 860 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 NSMCE1Q8WV22 266 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 ATG4AQ8WYN0 398 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 TADA1Q96BN2 335 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 ECHDC3Q96DC8 303 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 TOE1Q96GM8 510 aaKnown RBP12.02□□□□□ -0.49
APTX-233ENST00000496030 MS4A14Q96JA4 679 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 PBKQ96KB5 322 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 TEKT5Q96M29 485 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 KLHL32Q96NJ5 620 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 TUBGCP5Q96RT8 1024 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 OSBPL9Q96SU4 736 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 SEMA3CQ99985 751 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 HDAC8Q9BY41 377 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 TMEM9BQ9NQ34 198 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 DKK3Q9UBP4 350 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 TTC7AQ9ULT0 858 aaPredicted RBP12.02□□□□□ -0.49
APTX-233ENST00000496030 FZD4Q9ULV1 537 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 SNX12Q9UMY4 172 aa12.02□□□□□ -0.49
APTX-233ENST00000496030 C16orf96A6NNT2 1141 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 CYSRT1A8MQ03 144 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 C1QTNF3-AMACRE9PGA6 284 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 H7C0C1 242 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 HTRA2O43464 458 aaPredicted RBP12.01□□□□□ -0.49
APTX-233ENST00000496030 RNASEH2AO75792 299 aaKnown RBP12.01□□□□□ -0.49
APTX-233ENST00000496030 FGGP02679 453 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 ACADMP11310 421 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 TIMP2P16035 220 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 OXTRP30559 389 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 ATP5OP48047 213 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 AP1S1P61966 158 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 BYSLQ13895 437 aaKnown RBP12.01□□□□□ -0.49
APTX-233ENST00000496030 OASLQ15646 514 aaKnown RBP12.01□□□□□ -0.49
APTX-233ENST00000496030 COL28A1Q2UY09 1125 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 UAP1L1Q3KQV9 507 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 TTC31Q49AM3 519 aaPredicted RBP12.01□□□□□ -0.49
APTX-233ENST00000496030 RALGPS1Q5JS13 557 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 NYAP1Q6ZVC0 841 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 ERN2Q76MJ5 926 aaKnown RBP12.01□□□□□ -0.49
APTX-233ENST00000496030 PARS2Q7L3T8 475 aaKnown RBP12.01□□□□□ -0.49
APTX-233ENST00000496030 PRPF39Q86UA1 669 aaKnown RBP12.01□□□□□ -0.49
APTX-233ENST00000496030 ZNF567Q8N184 647 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 HCAR2Q8TDS4 363 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 C1orf54Q8WWF1 131 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 HTR3CQ8WXA8 447 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 ZNF641Q96N77 438 aaPredicted RBP12.01□□□□□ -0.49
APTX-233ENST00000496030 AGAP3Q96P47 875 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 OMDQ99983 421 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 OSBPL1AQ9BXW6 950 aa12.01□□□□□ -0.49
APTX-233ENST00000496030 SUV39H2Q9H5I1 410 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms