RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 CD27P26842 260 aa20.22■□□□□ 0.83
LMO4-204ENST00000495705 EIF3EP60228 445 aaKnown RBP20.22■□□□□ 0.83
LMO4-204ENST00000495705 PPP2CBP62714 309 aa20.22■□□□□ 0.83
LMO4-204ENST00000495705 PPP2CAP67775 309 aa20.22■□□□□ 0.83
LMO4-204ENST00000495705 DSC2Q02487 901 aa20.22■□□□□ 0.83
LMO4-204ENST00000495705 ELP6Q0PNE2 266 aa20.22■□□□□ 0.83
LMO4-204ENST00000495705 UGP2Q16851 508 aa20.22■□□□□ 0.83
LMO4-204ENST00000495705 ZNF569Q5MCW4 686 aa20.22■□□□□ 0.83
LMO4-204ENST00000495705 KIAA1161Q6NSJ0 714 aa20.22■□□□□ 0.83
LMO4-204ENST00000495705 CNTD1Q8N815 330 aa20.22■□□□□ 0.83
LMO4-204ENST00000495705 CEP76Q8TAP6 659 aa20.22■□□□□ 0.83
LMO4-204ENST00000495705 NSMCE3Q96MG7 304 aa20.22■□□□□ 0.83
LMO4-204ENST00000495705 EIF2B4Q9UI10 523 aaKnown RBP20.22■□□□□ 0.83
LMO4-204ENST00000495705 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.22■□□□□ 0.83
LMO4-204ENST00000495705 WDR87Q6ZQQ6 2873 aa20.22■□□□□ 0.83
LMO4-204ENST00000495705 ZNF292O60281 2723 aa20.22■□□□□ 0.83
LMO4-204ENST00000495705 TRPM6Q9BX84 2022 aa20.22■□□□□ 0.83
LMO4-204ENST00000495705 ATXN2Q99700 1313 aaKnown RBP20.22■□□□□ 0.83
LMO4-204ENST00000495705 A0A1W2PPC4 97 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 NEMP1O14524 444 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 AREL1O15033 823 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 RNGTTO60942 597 aaKnown RBP20.21■□□□□ 0.83
LMO4-204ENST00000495705 ZNF806P0C7X5 589 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 SPEM2Q0P670 501 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 CSRP2Q16527 193 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 DUOXA1Q1HG43 343 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 SETMARQ53H47 684 aaPredicted RBP20.21■□□□□ 0.83
LMO4-204ENST00000495705 ERAP2Q6P179 960 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 B4GALNT4Q76KP1 1039 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 PRPF39Q86UA1 669 aaKnown RBP20.21■□□□□ 0.83
LMO4-204ENST00000495705 HORMAD1Q86X24 394 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 SLC13A5Q86YT5 568 aaPredicted RBP20.21■□□□□ 0.83
LMO4-204ENST00000495705 DCLK2Q8N568 766 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 ARRDC2Q8TBH0 407 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 FEM1CQ96JP0 617 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 TEKT5Q96M29 485 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 AGAP3Q96P47 875 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 CEP41Q9BYV8 373 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 FRMD8P1Q9BZ68 369 aaPredicted RBP20.21■□□□□ 0.83
LMO4-204ENST00000495705 MIR1-1HGQ9H1L0 117 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 SEMA4GQ9NTN9 838 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 TMEM74BQ9NUR3 256 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 DMTF1Q9Y222 760 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 PCDHGC4Q9Y5F7 938 aa20.21■□□□□ 0.83
LMO4-204ENST00000495705 PLXNA2O75051 1894 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 CACNA1EQ15878 2313 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 A0A1W2PQU0 124 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 PRR5-ARHGAP8B1AHC4 643 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 CPP00450 1065 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 NFKBIAP25963 317 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 MAOBP27338 520 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 RPS21P63220 83 aaKnown RBP20.2■□□□□ 0.82
LMO4-204ENST00000495705 WASHC5Q12768 1159 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 TRAF2Q12933 501 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 ARMC12Q5T9G4 340 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 DARS2Q6PI48 645 aaKnown RBP20.2■□□□□ 0.82
LMO4-204ENST00000495705 ALYREFQ86V81 257 aaKnown RBP20.2■□□□□ 0.82
LMO4-204ENST00000495705 ZSWIM9Q86XI8 627 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 SLC35F6Q8N357 371 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 PDCD6IPQ8WUM4 868 aaKnown RBP20.2■□□□□ 0.82
LMO4-204ENST00000495705 SLC25A51Q9H1U9 297 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 KLHL8Q9P2G9 620 aaPredicted RBP20.2■□□□□ 0.82
LMO4-204ENST00000495705 TRHDEQ9UKU6 1024 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 RAI2Q9Y5P3 530 aa20.2■□□□□ 0.82
LMO4-204ENST00000495705 PTPRZ1P23471 2315 aaPredicted RBP20.19■□□□□ 0.82
LMO4-204ENST00000495705 A0A1B0GTW7 788 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 USP27XA6NNY8 438 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 ENC1O14682 589 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 RIOK3O14730 519 aaKnown RBP20.19■□□□□ 0.82
LMO4-204ENST00000495705 SPINT1O43278 529 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 STK10O94804 968 aaKnown RBP20.19■□□□□ 0.82
LMO4-204ENST00000495705 PGLSO95336 258 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 RBL1P28749 1068 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 NIPAL4Q0D2K0 466 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 SLC14A2Q15849 920 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 TMEM259Q4ZIN3 620 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 LRRC73Q5JTD7 316 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 SLC23A3Q6PIS1 610 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 ZCCHC9Q8N567 271 aaKnown RBP20.19■□□□□ 0.82
LMO4-204ENST00000495705 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.19■□□□□ 0.82
LMO4-204ENST00000495705 C1orf216Q8TAB5 229 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 MAIP1Q8WWC4 291 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 FAM118BQ9BPY3 351 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 ORAI3Q9BRQ5 295 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 TDRD1Q9BXT4 1180 aaKnown RBP20.19■□□□□ 0.82
LMO4-204ENST00000495705 GLOD4Q9HC38 313 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 PARD6AQ9NPB6 346 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 PCDH12Q9NPG4 1184 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 PHTF1Q9UMS5 762 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 ITM2BQ9Y287 266 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 PCDHB9Q9Y5E1 797 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 FRYLO94915 3013 aa20.19■□□□□ 0.82
LMO4-204ENST00000495705 TCRBV7S2A1N4TA0A589 114 aa20.18■□□□□ 0.82
LMO4-204ENST00000495705 KHNYNO15037 678 aaKnown RBP20.18■□□□□ 0.82
LMO4-204ENST00000495705 BCAT2O15382 392 aaPredicted RBP20.18■□□□□ 0.82
LMO4-204ENST00000495705 FZD6O60353 706 aa20.18■□□□□ 0.82
LMO4-204ENST00000495705 MAT2AP31153 395 aaKnown RBP20.18■□□□□ 0.82
LMO4-204ENST00000495705 MMP12P39900 470 aa20.18■□□□□ 0.82
LMO4-204ENST00000495705 CD86P42081 329 aa20.18■□□□□ 0.82
LMO4-204ENST00000495705 CCDC6Q16204 474 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms