RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 ST8SIA6P61647 398 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 BCL2L1Q07817 233 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 TRAF2Q12933 501 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 MSLNQ13421 630 aaPredicted RBP11.12□□□□□ -0.63
PKP4-215ENST00000494945 POU6F1Q14863 301 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 CRYMQ14894 314 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 SMAD2Q15796 467 aaKnown RBP11.12□□□□□ -0.63
PKP4-215ENST00000494945 PTPRNQ16849 979 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 MYLK3Q32MK0 819 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 PUS10Q3MIT2 529 aaKnown RBP11.12□□□□□ -0.63
PKP4-215ENST00000494945 KRT71Q3SY84 523 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 LEXMQ3ZCV2 418 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 ACCSLQ4AC99 568 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 PKN3Q6P5Z2 889 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 ZNF449Q6P9G9 518 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 CAPN12Q6ZSI9 719 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 NLRP9Q7RTR0 991 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 KDELC2Q7Z4H8 507 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 RNF135Q8IUD6 432 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 RIBC1Q8N443 379 aaPredicted RBP11.12□□□□□ -0.63
PKP4-215ENST00000494945 SLC25A41Q8N5S1 370 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 DEFB123Q8N688 67 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 FBF1Q8TES7 1133 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 FRS2Q8WU20 508 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 CYB5D2Q8WUJ1 264 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 MYO19Q96H55 970 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 CYTH2Q99418 400 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 TNKS2Q9H2K2 1166 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 PLAC1Q9HBJ0 212 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 HECAQ9UBI9 543 aaPredicted RBP11.12□□□□□ -0.63
PKP4-215ENST00000494945 PRKAG3Q9UGI9 489 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 EVLQ9UI08 416 aaPredicted RBP11.12□□□□□ -0.63
PKP4-215ENST00000494945 SLC24A2Q9UI40 661 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 PLA2G4CQ9UP65 541 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 CHKBQ9Y259 395 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 RPS6KL1Q9Y6S9 549 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 SZT2Q5T011 3432 aa11.12□□□□□ -0.63
PKP4-215ENST00000494945 A0A1W2PQ67 120 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 ANKRD66B4E2M5 251 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 PRRT4C9JH25 899 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 GOLGA8KD6RF30 607 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 HTRA2O43464 458 aaPredicted RBP11.11□□□□□ -0.63
PKP4-215ENST00000494945 CDH16O75309 829 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 KAT7O95251 611 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 SYF2O95926 243 aaKnown RBP11.11□□□□□ -0.63
PKP4-215ENST00000494945 PRLP01236 227 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 APODP05090 189 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 SP100P23497 879 aaPredicted RBP11.11□□□□□ -0.63
PKP4-215ENST00000494945 GRIA2P42262 883 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 GRIA4P48058 902 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 CCNHP51946 323 aaPredicted RBP11.11□□□□□ -0.63
PKP4-215ENST00000494945 NAB1Q13506 487 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 GALNT3Q14435 633 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 RASA2Q15283 850 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 AAK1Q2M2I8 961 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 ANKRD20A4Q4UJ75 823 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 ARMC12Q5T9G4 340 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 AGBL2Q5U5Z8 902 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 TDRPQ86YL5 185 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 CNPY4Q8N129 248 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 RYBPQ8N488 228 aaPredicted RBP11.11□□□□□ -0.63
PKP4-215ENST00000494945 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.11□□□□□ -0.63
PKP4-215ENST00000494945 TTC8Q8TAM2 541 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 EPS8L3Q8TE67 593 aaKnown RBP11.11□□□□□ -0.63
PKP4-215ENST00000494945 SORCS1Q8WY21 1168 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 SPOCK2Q92563 424 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 DNASE1L2Q92874 299 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 PEX13Q92968 403 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 ZNF669Q96BR6 464 aaPredicted RBP11.11□□□□□ -0.63
PKP4-215ENST00000494945 RMDN1Q96DB5 314 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 CHFRQ96EP1 664 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 PGM2Q96G03 612 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 ZNF641Q96N77 438 aaPredicted RBP11.11□□□□□ -0.63
PKP4-215ENST00000494945 SRPK1Q96SB4 655 aaKnown RBP11.11□□□□□ -0.63
PKP4-215ENST00000494945 STMN4Q9H169 189 aaPredicted RBP11.11□□□□□ -0.63
PKP4-215ENST00000494945 TMBIM4Q9HC24 238 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 CHRAC1Q9NRG0 131 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 MOCS1Q9NZB8 636 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 HACD3Q9P035 362 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 VPS18Q9P253 973 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 FAM50BQ9Y247 325 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 PCDHGC4Q9Y5F7 938 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 FAM169AQ9Y6X4 670 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 F5P12259 2224 aa11.11□□□□□ -0.63
PKP4-215ENST00000494945 EDDM13A0A1B0GTR0 161 aa11.1□□□□□ -0.63
PKP4-215ENST00000494945 ZCWPW2A0A1B0GU75 182 aa11.1□□□□□ -0.63
PKP4-215ENST00000494945 TBC1D3BA6NDS4 549 aa11.1□□□□□ -0.63
PKP4-215ENST00000494945 FAM159BA6NKW6 160 aa11.1□□□□□ -0.63
PKP4-215ENST00000494945 TRAFD1O14545 582 aaPredicted RBP11.1□□□□□ -0.63
PKP4-215ENST00000494945 NPC1O15118 1278 aa11.1□□□□□ -0.63
PKP4-215ENST00000494945 PGLSO95336 258 aa11.1□□□□□ -0.63
PKP4-215ENST00000494945 C1QAP02745 245 aa11.1□□□□□ -0.63
PKP4-215ENST00000494945 PDHA1P08559 390 aa11.1□□□□□ -0.63
PKP4-215ENST00000494945 PAMP19021 973 aa11.1□□□□□ -0.63
PKP4-215ENST00000494945 MESP2Q0VG99 397 aa11.1□□□□□ -0.63
PKP4-215ENST00000494945 SEPT6Q14141 434 aa11.1□□□□□ -0.63
PKP4-215ENST00000494945 LONRF1Q17RB8 773 aa11.1□□□□□ -0.63
PKP4-215ENST00000494945 KBTBD12Q3ZCT8 623 aa11.1□□□□□ -0.63
PKP4-215ENST00000494945 FNDC3BQ53EP0 1204 aaKnown RBP11.1□□□□□ -0.63
PKP4-215ENST00000494945 DPY19L3Q6ZPD9 716 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms