RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PAF1Q8N7H5 531 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 CCDC42Q96M95 316 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 CAAP1Q9H8G2 361 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 NHEJ1Q9H9Q4 299 aaPredicted RBP33.52■■■□□ 2.96
CBX4-203ENST00000494546 PCDH12Q9NPG4 1184 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 SPTLC3Q9NUV7 552 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 DNAJC28Q9NX36 388 aa33.52■■■□□ 2.96
CBX4-203ENST00000494546 RCOR3Q9P2K3 495 aaPredicted RBP33.52■■■□□ 2.96
CBX4-203ENST00000494546 TMEM110-MUSTN1A8MSY1 372 aa33.51■■■□□ 2.95
CBX4-203ENST00000494546 IL4RP24394 825 aa33.51■■■□□ 2.95
CBX4-203ENST00000494546 RENBPP51606 427 aa33.51■■■□□ 2.95
CBX4-203ENST00000494546 BCL2L1Q07817 233 aa33.51■■■□□ 2.95
CBX4-203ENST00000494546 ZNF235Q14590 738 aa33.51■■■□□ 2.95
CBX4-203ENST00000494546 TMEM52BQ4KMG9 183 aa33.51■■■□□ 2.95
CBX4-203ENST00000494546 ERAP2Q6P179 960 aa33.51■■■□□ 2.95
CBX4-203ENST00000494546 CENPTQ96BT3 561 aa33.51■■■□□ 2.95
CBX4-203ENST00000494546 PSKH2Q96QS6 385 aa33.51■■■□□ 2.95
CBX4-203ENST00000494546 C1QTNF7Q9BXJ2 289 aa33.51■■■□□ 2.95
CBX4-203ENST00000494546 GPR27Q9NS67 375 aa33.51■■■□□ 2.95
CBX4-203ENST00000494546 DGKAP23743 735 aa33.5■■■□□ 2.95
CBX4-203ENST00000494546 TAS2R40P59535 323 aa33.5■■■□□ 2.95
CBX4-203ENST00000494546 PDE1CQ14123 709 aaPredicted RBP33.5■■■□□ 2.95
CBX4-203ENST00000494546 FZD2Q14332 565 aa33.5■■■□□ 2.95
CBX4-203ENST00000494546 ZSWIM9Q86XI8 627 aa33.5■■■□□ 2.95
CBX4-203ENST00000494546 SLC25A45Q8N413 288 aa33.5■■■□□ 2.95
CBX4-203ENST00000494546 KCTD6Q8NC69 237 aa33.5■■■□□ 2.95
CBX4-203ENST00000494546 FAM71BQ8TC56 605 aa33.5■■■□□ 2.95
CBX4-203ENST00000494546 UCKL1Q9NWZ5 548 aa33.5■■■□□ 2.95
CBX4-203ENST00000494546 LCMT1Q9UIC8 334 aa33.5■■■□□ 2.95
CBX4-203ENST00000494546 CEP295Q9C0D2 2601 aa33.5■■■□□ 2.95
CBX4-203ENST00000494546 COL5A1P20908 1838 aaPredicted RBP33.5■■■□□ 2.95
CBX4-203ENST00000494546 MAFKO60675 156 aa33.49■■■□□ 2.95
CBX4-203ENST00000494546 PRKCGP05129 697 aa33.49■■■□□ 2.95
CBX4-203ENST00000494546 SEMG2Q02383 582 aa33.49■■■□□ 2.95
CBX4-203ENST00000494546 DPYSL3Q14195 570 aa33.49■■■□□ 2.95
CBX4-203ENST00000494546 CNGA4Q8IV77 575 aa33.49■■■□□ 2.95
CBX4-203ENST00000494546 NSMCE1Q8WV22 266 aa33.49■■■□□ 2.95
CBX4-203ENST00000494546 IFT43Q96FT9 208 aa33.49■■■□□ 2.95
CBX4-203ENST00000494546 TRIM5Q9C035 493 aa33.49■■■□□ 2.95
CBX4-203ENST00000494546 ATP8A1Q9Y2Q0 1164 aa33.49■■■□□ 2.95
CBX4-203ENST00000494546 COQ6Q9Y2Z9 468 aa33.49■■■□□ 2.95
CBX4-203ENST00000494546 SPTY2D1-AS1A0A0U1RR47 76 aa33.48■■■□□ 2.95
CBX4-203ENST00000494546 TTC24A2A3L6 582 aaPredicted RBP33.48■■■□□ 2.95
CBX4-203ENST00000494546 AKR1B15C9JRZ8 316 aaPredicted RBP33.48■■■□□ 2.95
CBX4-203ENST00000494546 RIOK3O14730 519 aaKnown RBP33.48■■■□□ 2.95
CBX4-203ENST00000494546 PIAS2O75928 621 aa33.48■■■□□ 2.95
CBX4-203ENST00000494546 PEX11BO96011 259 aa33.48■■■□□ 2.95
CBX4-203ENST00000494546 IGFALSP35858 605 aa33.48■■■□□ 2.95
CBX4-203ENST00000494546 ARSEP51690 589 aa33.48■■■□□ 2.95
CBX4-203ENST00000494546 AP1S1P61966 158 aa33.48■■■□□ 2.95
CBX4-203ENST00000494546 TPRG1LQ5T0D9 272 aa33.48■■■□□ 2.95
CBX4-203ENST00000494546 ZFYVE27Q5T4F4 411 aa33.48■■■□□ 2.95
CBX4-203ENST00000494546 DHRS13Q6UX07 377 aa33.48■■■□□ 2.95
CBX4-203ENST00000494546 PARGQ86W56 976 aa33.48■■■□□ 2.95
CBX4-203ENST00000494546 MAP1BP46821 2468 aaKnown RBP33.47■■■□□ 2.95
CBX4-203ENST00000494546 FFAR2O15552 330 aa33.47■■■□□ 2.95
CBX4-203ENST00000494546 PFN3P60673 137 aa33.47■■■□□ 2.95
CBX4-203ENST00000494546 MESDQ14696 234 aa33.47■■■□□ 2.95
CBX4-203ENST00000494546 TMPRSS7Q7RTY8 843 aa33.47■■■□□ 2.95
CBX4-203ENST00000494546 BBS5Q8N3I7 341 aa33.47■■■□□ 2.95
CBX4-203ENST00000494546 SLC35G2Q8TBE7 412 aa33.47■■■□□ 2.95
CBX4-203ENST00000494546 MBNL1Q9NR56 388 aaKnown RBP33.47■■■□□ 2.95
CBX4-203ENST00000494546 TRIM38O00635 465 aa33.46■■■□□ 2.95
CBX4-203ENST00000494546 KRT7P08729 469 aa33.46■■■□□ 2.95
CBX4-203ENST00000494546 C6P13671 934 aa33.46■■■□□ 2.95
CBX4-203ENST00000494546 HSPA9P38646 679 aaKnown RBP33.46■■■□□ 2.95
CBX4-203ENST00000494546 HNRNPKP61978 463 aaKnown RBP eCLIP33.46■■■□□ 2.95
CBX4-203ENST00000494546 HS1BP3Q53T59 392 aa33.46■■■□□ 2.95
CBX4-203ENST00000494546 SARM1Q6SZW1 724 aa33.46■■■□□ 2.95
CBX4-203ENST00000494546 CCNI2Q6ZMN8 369 aaPredicted RBP33.46■■■□□ 2.95
CBX4-203ENST00000494546 TP53I13Q8NBR0 393 aaPredicted RBP33.46■■■□□ 2.95
CBX4-203ENST00000494546 ECHDC3Q96DC8 303 aa33.46■■■□□ 2.95
CBX4-203ENST00000494546 NSMCE3Q96MG7 304 aa33.46■■■□□ 2.95
CBX4-203ENST00000494546 PCDHGA1Q9Y5H4 931 aa33.46■■■□□ 2.95
CBX4-203ENST00000494546 SIGLEC6O43699 453 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 MFSD11O43934 449 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 RFPL3O75679 317 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 MAN1A1P33908 653 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 MMP12P39900 470 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 ACADVLP49748 655 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 LIG3P49916 1009 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 THOP1P52888 689 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 TBX2Q13207 712 aaPredicted RBP33.45■■■□□ 2.95
CBX4-203ENST00000494546 PDK2Q15119 407 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 IRF4Q15306 451 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 ANKRD20A8PQ5CZ79 823 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 MAP7D3Q8IWC1 876 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 PGBD5Q8N414 524 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 PCDH19Q8TAB3 1148 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 ZNF670Q9BS34 389 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 SCUBE2Q9NQ36 999 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 SPEGQ15772 3267 aa33.45■■■□□ 2.95
CBX4-203ENST00000494546 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP33.44■■■□□ 2.94
CBX4-203ENST00000494546 TRAFD1O14545 582 aaPredicted RBP33.44■■■□□ 2.94
CBX4-203ENST00000494546 LZTS3O60299 673 aaPredicted RBP33.44■■■□□ 2.94
CBX4-203ENST00000494546 CSF2P04141 144 aa33.44■■■□□ 2.94
CBX4-203ENST00000494546 MMP13P45452 471 aa33.44■■■□□ 2.94
CBX4-203ENST00000494546 POLR2LP62875 67 aaKnown RBP33.44■■■□□ 2.94
CBX4-203ENST00000494546 ZNF211Q13398 564 aaPredicted RBP33.44■■■□□ 2.94
CBX4-203ENST00000494546 LRRC14Q15048 493 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms