RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 MBLAC2Q68D91 279 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 C7orf61Q8IZ16 206 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 ELMOD1Q8N336 334 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 C1QTNF1Q9BXJ1 281 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 ASAH2Q9NR71 780 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 CHD9Q3L8U1 2897 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 TRAV19A0A0A6YYK7 116 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 CCL22O00626 93 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 SLC7A4O43246 635 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 HAUS5O94927 633 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 ARHGEF15O94989 841 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 FSBPO95073 299 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 SLC35E2BP0CK96 405 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 FGF3P11487 239 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-225ENST00000494465 CSKP41240 450 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 SCTRP47872 440 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 ACTN3Q08043 901 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-225ENST00000494465 CAMK1Q14012 370 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 FYB2Q5VWT5 728 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 ATG16L1Q676U5 607 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 KIAA0408Q6ZU52 694 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 NLRP9Q7RTR0 991 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 SLC41A1Q8IVJ1 513 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 CPXM2Q8N436 756 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 TTC16Q8NEE8 873 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 ZNF398Q8TD17 642 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 BHMTQ93088 406 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 C7orf26Q96N11 449 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 NUDCD1Q96RS6 583 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 C17orf80Q9BSJ5 609 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 KCNK13Q9HB14 408 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 LSM7Q9UK45 103 aaKnown RBP16.65■□□□□ 0.26
ATG4B-225ENST00000494465 CHKBQ9Y259 395 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 ARL5AQ9Y689 179 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 LINC01553A4QN01 128 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 DLDP09622 509 aaKnown RBP16.64■□□□□ 0.25
ATG4B-225ENST00000494465 SYN1P17600 705 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 EPHA5P54756 1037 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 USP10Q14694 798 aaKnown RBP16.64■□□□□ 0.25
ATG4B-225ENST00000494465 ZNF789Q5FWF6 425 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 ZCCHC23Q6ZST2 131 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 CEP97Q8IW35 865 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 BRSK1Q8TDC3 778 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 BLOC1S5Q8TDH9 187 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 HDAC10Q969S8 669 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 TDRD1Q9BXT4 1180 aaKnown RBP16.64■□□□□ 0.25
ATG4B-225ENST00000494465 SMG9Q9H0W8 520 aaKnown RBP16.64■□□□□ 0.25
ATG4B-225ENST00000494465 MFSD1Q9H3U5 465 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 ACTR5Q9H9F9 607 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-225ENST00000494465 SCUBE2Q9NQ36 999 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 TLR9Q9NR96 1032 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.64■□□□□ 0.25
ATG4B-225ENST00000494465 COPG2Q9UBF2 871 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 LHX3Q9UBR4 397 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 VPS51Q9UID3 782 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 FAM95CA0A1B0GW59 222 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 LEFTY2O00292 366 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 PHGDHO43175 533 aaKnown RBP16.64■□□□□ 0.25
ATG4B-225ENST00000494465 RFPL2O75678 378 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 PIRTP0C851 137 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 TROVE2P10155 538 aaKnown RBP eCLIP16.64■□□□□ 0.254e-6■□□□□ 9.4
ATG4B-225ENST00000494465 KCNA4P22459 653 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 LEPRP48357 1165 aaKnown RBP16.64■□□□□ 0.25
ATG4B-225ENST00000494465 CD151P48509 253 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 POLD2P49005 469 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 CCDC15Q0P6D6 951 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 PTPRCAPQ14761 206 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 CCDC153Q494R4 210 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 INO80DQ53TQ3 878 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-225ENST00000494465 PPM1LQ5SGD2 360 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 CNSTQ6PJW8 725 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 PNPLA1Q8N8W4 532 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 TDRD5Q8NAT2 981 aaKnown RBP16.64■□□□□ 0.25
ATG4B-225ENST00000494465 SHKBP1Q8TBC3 707 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 PEX13Q92968 403 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 TRIM55Q9BYV6 548 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 FBXO6Q9NRD1 293 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-225ENST00000494465 DCTN4Q9UJW0 460 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 VPS28Q9UK41 221 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 CLEC4EQ9ULY5 219 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 ZNF510Q9Y2H8 683 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 SH3BP1Q9Y3L3 701 aa16.64■□□□□ 0.25
ATG4B-225ENST00000494465 TYW5A2RUC4 315 aaKnown RBP16.63■□□□□ 0.25
ATG4B-225ENST00000494465 MOSPD3O75425 235 aa16.63■□□□□ 0.25
ATG4B-225ENST00000494465 PDHA1P08559 390 aa16.63■□□□□ 0.25
ATG4B-225ENST00000494465 PFKLP17858 780 aa16.63■□□□□ 0.25
ATG4B-225ENST00000494465 CES1P23141 567 aa16.63■□□□□ 0.25
ATG4B-225ENST00000494465 IRS1P35568 1242 aa16.63■□□□□ 0.25
ATG4B-225ENST00000494465 CDH18Q13634 790 aa16.63■□□□□ 0.25
ATG4B-225ENST00000494465 CILP2Q8IUL8 1156 aa16.63■□□□□ 0.25
ATG4B-225ENST00000494465 C10orf107Q8IVU9 208 aa16.63■□□□□ 0.25
ATG4B-225ENST00000494465 TNS4Q8IZW8 715 aa16.63■□□□□ 0.25
ATG4B-225ENST00000494465 TMEM151AQ8N4L1 468 aa16.63■□□□□ 0.25
ATG4B-225ENST00000494465 DCAF4L2Q8NA75 395 aa16.63■□□□□ 0.25
ATG4B-225ENST00000494465 RIN3Q8TB24 985 aa16.63■□□□□ 0.25
ATG4B-225ENST00000494465 CALML6Q8TD86 181 aa16.63■□□□□ 0.25
ATG4B-225ENST00000494465 TCEAL4Q96EI5 215 aa16.63■□□□□ 0.25
ATG4B-225ENST00000494465 DNAJC1Q96KC8 554 aaKnown RBP16.63■□□□□ 0.25
ATG4B-225ENST00000494465 ARIH1Q9Y4X5 557 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-225ENST00000494465 SPO11Q9Y5K1 396 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms