RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 CYTH1Q15438 398 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 CTC1Q2NKJ3 1217 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 ZNF789Q5FWF6 425 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 RBM20Q5T481 1227 aaKnown RBP10.73□□□□□ -0.69
CLCN6-208ENST00000494028 RNF219Q5W0B1 726 aaPredicted RBP10.73□□□□□ -0.69
CLCN6-208ENST00000494028 FBXW10Q5XX13 1052 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 FAM91A1Q658Y4 838 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 TXNDC8Q6A555 127 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 LRRC8EQ6NSJ5 796 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 NEPROQ6NW34 567 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 LILRA6Q6PI73 481 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 ZYG11AQ6WRX3 759 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 ATG14Q6ZNE5 492 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 GAREM2Q75VX8 874 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 LCA5Q86VQ0 697 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 HS6ST3Q8IZP7 471 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 DCAF4L2Q8NA75 395 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 PPP1R14CQ8TAE6 165 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 KCTD4Q8WVF5 259 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 PEX13Q92968 403 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 CLP1Q92989 425 aaKnown RBP10.73□□□□□ -0.69
CLCN6-208ENST00000494028 IFT43Q96FT9 208 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 ELMO2Q96JJ3 720 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 DNAJC1Q96KC8 554 aaKnown RBP10.73□□□□□ -0.69
CLCN6-208ENST00000494028 LRRC37BQ96QE4 947 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 SORT1Q99523 831 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 TXLNGQ9NUQ3 528 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 KCNK4Q9NYG8 393 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.73□□□□□ -0.69
CLCN6-208ENST00000494028 MARCH4Q9P2E8 410 aaPredicted RBP10.73□□□□□ -0.69
CLCN6-208ENST00000494028 MARCOQ9UEW3 520 aaPredicted RBP10.73□□□□□ -0.69
CLCN6-208ENST00000494028 RIMKLBQ9ULI2 386 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 SSX2IPQ9Y2D8 614 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 ASB3Q9Y575 518 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 KCTD3Q9Y597 815 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 SPO11Q9Y5K1 396 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 OR51B4Q9Y5P0 310 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 DOCK6Q96HP0 2047 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 OR51F1A6NGY5 319 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 INSIG1O15503 277 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 RPP40O75818 363 aaKnown RBP10.72□□□□□ -0.69
CLCN6-208ENST00000494028 RASSF9O75901 435 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 HAUS5O94927 633 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 WISP3O95389 354 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-208ENST00000494028 C1RP00736 705 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 LRG1P02750 347 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 APOA4P06727 396 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 SBK3P0C264 359 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 SPATA31D3P0C874 917 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 CPA3P15088 417 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 ALOX15P16050 662 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-208ENST00000494028 DNAJB1P25685 340 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 TARSP26639 723 aaKnown RBP10.72□□□□□ -0.69
CLCN6-208ENST00000494028 MZF1P28698 734 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-208ENST00000494028 CSKP41240 450 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 POLD2P49005 469 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 RAB10P61026 200 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 KCNJ2P63252 427 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 SLC7A9P82251 487 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 TRAF2Q12933 501 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 DLG1Q12959 904 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 ITGA9Q13797 1035 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 TTC31Q49AM3 519 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-208ENST00000494028 HSF5Q4G112 596 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-208ENST00000494028 FSCBQ5H9T9 825 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 CNSTQ6PJW8 725 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 SPATA31D4Q6ZUB0 917 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 RAPH1Q70E73 1250 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 ASRGL1Q7L266 308 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 MAVSQ7Z434 540 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 CCDC91Q7Z6B0 441 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 CLNKQ7Z7G1 428 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 PACS2Q86VP3 889 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 CRLF3Q8IUI8 442 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 CEP97Q8IW35 865 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.72□□□□□ -0.69
CLCN6-208ENST00000494028 GPATCH11Q8N954 259 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 KLHL23Q8NBE8 558 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 RDH11Q8TC12 318 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 CALML6Q8TD86 181 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 BLOC1S5Q8TDH9 187 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 MRPS31Q92665 395 aaKnown RBP10.72□□□□□ -0.69
CLCN6-208ENST00000494028 ALG14Q96F25 216 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 NUDCD1Q96RS6 583 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 NDNQ99608 321 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 OLFM1Q99784 485 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 MUC3BQ9H195 1237 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 LRMDAQ9H2I8 198 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 NOD2Q9HC29 1040 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 THAP1Q9NVV9 213 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 CXXC1Q9P0U4 656 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-208ENST00000494028 DNMT3BQ9UBC3 853 aaKnown RBP10.72□□□□□ -0.69
CLCN6-208ENST00000494028 XPR1Q9UBH6 696 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 ZFP69BQ9UJL9 534 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 DNAJC16Q9Y2G8 782 aa10.72□□□□□ -0.69
CLCN6-208ENST00000494028 A0A087X1B8 175 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 TYW5A2RUC4 315 aaKnown RBP10.71□□□□□ -0.69
CLCN6-208ENST00000494028 LCHNA4D1U4 455 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 TMEM114B3SHH9 223 aa10.71□□□□□ -0.69
CLCN6-208ENST00000494028 MUC22E2RYF6 1773 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms