RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 ARCQ7LC44 396 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 FAM131BQ86XD5 332 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 XYLT1Q86Y38 959 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 CCNJLQ8IV13 435 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 GDAP1L1Q96MZ0 367 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 CMKLR1Q99788 373 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 MAGEH1Q9H213 219 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 PDCL3Q9H2J4 239 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 DKK3Q9UBP4 350 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 APPL1Q9UKG1 709 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 SCN8AQ9UQD0 1980 aa17.87■□□□□ 0.45
NUP50-218ENST00000493456 PRAMEF33A0A0G2JMD5 474 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 A0A1W2PQC6 194 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 ZSCAN5CA6NGD5 496 aaPredicted RBP17.86■□□□□ 0.45
NUP50-218ENST00000493456 PRAMEF10O60809 474 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 PNLIPP16233 465 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 GLB1P16278 677 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 RHOQP17081 205 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 PON1P27169 355 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 TBR1Q16650 682 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 LRRC73Q5JTD7 316 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 MANEALQ5VSG8 457 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 NLRP14Q86W24 1093 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 MSANTD4Q8NCY6 345 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 GPR156Q8NFN8 814 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 TSACCQ96A04 125 aaPredicted RBP17.86■□□□□ 0.45
NUP50-218ENST00000493456 CFAP57Q96MR6 1250 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 B3GNT4Q9C0J1 378 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 SLC25A18Q9H1K4 315 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 TMEM248Q9NWD8 314 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 OR12D3Q9UGF7 316 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 CHD5Q8TDI0 1954 aa17.86■□□□□ 0.45
NUP50-218ENST00000493456 FOXN3O00409 490 aaPredicted RBP17.85■□□□□ 0.45
NUP50-218ENST00000493456 RAMP2O60895 175 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 IGSF6O95976 241 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 NTRK1P04629 796 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 ITIH1P19827 911 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 SRP54P61011 504 aaKnown RBP17.85■□□□□ 0.45
NUP50-218ENST00000493456 ELP6Q0PNE2 266 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 TMEM52BQ4KMG9 183 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 ATXN7L2Q5T6C5 722 aaPredicted RBP17.85■□□□□ 0.45
NUP50-218ENST00000493456 RWDD4Q6NW29 188 aaKnown RBP17.85■□□□□ 0.45
NUP50-218ENST00000493456 ENPP7Q6UWV6 458 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 VASH2Q86V25 355 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 DTX1Q86Y01 620 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 FAM71AQ8IYT1 594 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 CASKIN2Q8WXE0 1202 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 RBM15Q96T37 977 aaKnown RBP eCLIP17.85■□□□□ 0.45
NUP50-218ENST00000493456 WRAP53Q9BUR4 548 aaKnown RBP17.85■□□□□ 0.45
NUP50-218ENST00000493456 TTYH3Q9C0H2 523 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 NDFIP2Q9NV92 336 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 GEMIN8Q9NWZ8 242 aaKnown RBP17.85■□□□□ 0.45
NUP50-218ENST00000493456 KLQ9UEF7 1012 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 SEPT3Q9UH03 358 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 TMEM59LQ9UK28 342 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 DNAJC12Q9UKB3 198 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 AJAP1Q9UKB5 411 aaPredicted RBP17.85■□□□□ 0.45
NUP50-218ENST00000493456 MFHAS1Q9Y4C4 1052 aa17.85■□□□□ 0.45
NUP50-218ENST00000493456 TMCC1O94876 653 aa17.84■□□□□ 0.45
NUP50-218ENST00000493456 XPAP23025 273 aaPredicted RBP17.84■□□□□ 0.45
NUP50-218ENST00000493456 TCEA2Q15560 299 aa17.84■□□□□ 0.45
NUP50-218ENST00000493456 CERCAMQ5T4B2 595 aa17.84■□□□□ 0.45
NUP50-218ENST00000493456 TRNP1Q6NT89 227 aa17.84■□□□□ 0.45
NUP50-218ENST00000493456 RD3Q7Z3Z2 195 aa17.84■□□□□ 0.45
NUP50-218ENST00000493456 CREBRFQ8IUR6 639 aa17.84■□□□□ 0.45
NUP50-218ENST00000493456 ADNPQ9H2P0 1102 aa17.84■□□□□ 0.45
NUP50-218ENST00000493456 SIX2Q9NPC8 291 aa17.84■□□□□ 0.45
NUP50-218ENST00000493456 DNAI1Q9UI46 699 aa17.84■□□□□ 0.45
NUP50-218ENST00000493456 DGKBQ9Y6T7 804 aa17.84■□□□□ 0.45
NUP50-218ENST00000493456 LRP4O75096 1905 aa17.84■□□□□ 0.45
NUP50-218ENST00000493456 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.83■□□□□ 0.44
NUP50-218ENST00000493456 BIN1O00499 593 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 KDELR3O43731 214 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 LSM8O95777 96 aaKnown RBP17.83■□□□□ 0.44
NUP50-218ENST00000493456 TNFP01375 233 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 PNMA6AP0CW24 399 aaPredicted RBP17.83■□□□□ 0.44
NUP50-218ENST00000493456 TIMP2P16035 220 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 TLE1Q04724 770 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 AGERQ15109 404 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 WSCD2Q2TBF2 565 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 INO80DQ53TQ3 878 aaPredicted RBP17.83■□□□□ 0.44
NUP50-218ENST00000493456 TMEM164Q5U3C3 297 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 SPRED1Q7Z699 444 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 ZFAND4Q86XD8 727 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 Q8N9G6 341 aaPredicted RBP17.83■□□□□ 0.44
NUP50-218ENST00000493456 HCAR2Q8TDS4 363 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 HTR3CQ8WXA8 447 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 USP7Q93009 1102 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 TBC1D31Q96DN5 1066 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 WDR92Q96MX6 357 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 FUCA2Q9BTY2 467 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 APOOQ9BUR5 198 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 FOXJ2Q9P0K8 574 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 AKAP7Q9P0M2 348 aaPredicted RBP17.83■□□□□ 0.44
NUP50-218ENST00000493456 RNF215Q9Y6U7 377 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 LRRK2Q5S007 2527 aa17.83■□□□□ 0.44
NUP50-218ENST00000493456 TEX15Q9BXT5 2789 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 C9orf172C9J069 976 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 GOLGA8SH3BPF8 625 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 BUB1O43683 1085 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms