RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 CDH18Q13634 790 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 CHI3L2Q15782 390 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 FSCBQ5H9T9 825 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 PLPP4Q5VZY2 271 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 CLEC14AQ86T13 490 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 DENND6AQ8IWF6 608 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 OR13J1Q8NGT2 312 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 C7orf26Q96N11 449 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 MECRQ9BV79 373 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 TRIM55Q9BYV6 548 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 MFSD1Q9H3U5 465 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 CFAP97Q9P2B7 532 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 TLK1Q9UKI8 766 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 SLC39A10Q9ULF5 831 aa14.15□□□□□ -0.14
PTPN7-216ENST00000492977 COLQQ9Y215 455 aaPredicted RBP14.15□□□□□ -0.14
PTPN7-216ENST00000492977 A0A1W2PRU2 124 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 C5orf67F2Z3F1 127 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 TOP3BO95985 862 aaKnown RBP14.14□□□□□ -0.15
PTPN7-216ENST00000492977 COL6A2P12110 1019 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 MZF1P28698 734 aaPredicted RBP14.14□□□□□ -0.15
PTPN7-216ENST00000492977 SLC1A2P43004 574 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 CD151P48509 253 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 EPHA5P54756 1037 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 ACVR1Q04771 509 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 USP10Q14694 798 aaKnown RBP14.14□□□□□ -0.15
PTPN7-216ENST00000492977 MPPE1Q53F39 396 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 FASTKD1Q53R41 847 aaKnown RBP14.14□□□□□ -0.15
PTPN7-216ENST00000492977 RALGPS1Q5JS13 557 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 ZNF470Q6ECI4 717 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 C16orf46Q6P387 395 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 C7orf61Q8IZ16 206 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 TDRD5Q8NAT2 981 aaKnown RBP14.14□□□□□ -0.15
PTPN7-216ENST00000492977 SLC22A17Q8WUG5 538 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 C10orf82Q8WW14 230 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 ALG14Q96F25 216 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 SLC46A2Q9BY10 475 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 CAB39LQ9H9S4 337 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 ABCF3Q9NUQ8 709 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.14□□□□□ -0.15
PTPN7-216ENST00000492977 TMEM216Q9P0N5 145 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 GGT7Q9UJ14 662 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 VPS28Q9UK41 221 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 ARHGAP26Q9UNA1 814 aa14.14□□□□□ -0.15
PTPN7-216ENST00000492977 LINC01553A4QN01 128 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 SOBPA7XYQ1 873 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 LEFTY2O00292 366 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 CCL16O15467 120 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 SNAP91O60641 907 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 DCTN3O75935 186 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 TMCC1O94876 653 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 FSBPO95073 299 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 CD160O95971 181 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 PRKCGP05129 697 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 APOA4P06727 396 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 PTPN2P17706 415 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 CRABP2P29373 138 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 ABCG1P45844 678 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 RGRP47804 291 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 LEPRP48357 1165 aaKnown RBP14.13□□□□□ -0.15
PTPN7-216ENST00000492977 NUMBP49757 651 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 PRAMEP78395 509 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 MPP1Q00013 466 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 POU4F1Q01851 419 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 ACTN3Q08043 901 aaPredicted RBP14.13□□□□□ -0.15
PTPN7-216ENST00000492977 BST1Q10588 318 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 STX3Q13277 289 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 SLC12A1Q13621 1099 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 GALNTL6Q49A17 601 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 TAF1BQ53T94 588 aaPredicted RBP14.13□□□□□ -0.15
PTPN7-216ENST00000492977 MFN1Q8IWA4 741 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 DCAF4L2Q8NA75 395 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 DDI1Q8WTU0 396 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 STYXQ8WUJ0 223 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 RMDN2Q96LZ7 410 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 NPHS2Q9NP85 383 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 THAP1Q9NVV9 213 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 DNMT3BQ9UBC3 853 aaKnown RBP14.13□□□□□ -0.15
PTPN7-216ENST00000492977 FAM95CA0A1B0GW59 222 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 E2F8A0AVK6 867 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 SCAMP3O14828 347 aaKnown RBP14.13□□□□□ -0.15
PTPN7-216ENST00000492977 SNNO75324 88 aaPredicted RBP14.13□□□□□ -0.15
PTPN7-216ENST00000492977 CRTAMO95727 393 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 RB1P06400 928 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 F7P08709 466 aaPredicted RBP14.13□□□□□ -0.15
PTPN7-216ENST00000492977 STMN1P16949 149 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 GRK2P25098 689 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 HOXA9P31269 272 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 CSKP41240 450 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 OCRLQ01968 901 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 GALNT3Q14435 633 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 PCLAFQ15004 111 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 SETDB1Q15047 1291 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 DLG2Q15700 870 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 RAPH1Q70E73 1250 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 CILP2Q8IUL8 1156 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 BBS7Q8IWZ6 715 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 PLD6Q8N2A8 252 aaKnown RBP14.13□□□□□ -0.15
PTPN7-216ENST00000492977 LEMD2Q8NC56 503 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 ACVR1CQ8NER5 493 aa14.13□□□□□ -0.15
PTPN7-216ENST00000492977 PPP1R14CQ8TAE6 165 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms