RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 SETMARQ53H47 684 aaPredicted RBP14.09□□□□□ -0.15
CCM2-217ENST00000492883 TEX44Q53QW1 395 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 SLC45A4Q5BKX6 768 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 ZNF569Q5MCW4 686 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 FAM182AQ5T1J6 154 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 TCEAL6Q6IPX3 200 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 KIAA1161Q6NSJ0 714 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 ERAP2Q6P179 960 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 DARS2Q6PI48 645 aaKnown RBP14.09□□□□□ -0.15
CCM2-217ENST00000492883 PRR23CQ6ZRP0 262 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 TTC13Q8NBP0 860 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 ARRDC2Q8TBH0 407 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 HTR3CQ8WXA8 447 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 KLK6Q92876 244 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 TCEAL3Q969E4 200 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 SERAC1Q96JX3 654 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 FAM118BQ9BPY3 351 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 EBF2Q9HAK2 575 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 SLC6A14Q9UN76 642 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 ITM2BQ9Y287 266 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 PCDHB9Q9Y5E1 797 aa14.09□□□□□ -0.15
CCM2-217ENST00000492883 MUC6Q6W4X9 2439 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 AREL1O15033 823 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 SLC31A1O15431 190 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 HTRA2O43464 458 aaPredicted RBP14.08□□□□□ -0.16
CCM2-217ENST00000492883 PRKCGP05129 697 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 SERPINF2P08697 491 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 RBP3P10745 1247 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 MSNP26038 577 aaKnown RBP14.08□□□□□ -0.16
CCM2-217ENST00000492883 PTPN3P26045 913 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 RBL1P28749 1068 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 NIPAL4Q0D2K0 466 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 TRAF2Q12933 501 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 SGCGQ13326 291 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 STAT4Q14765 748 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 TEAD4Q15561 434 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 ZNF284Q2VY69 593 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 AASDHQ4L235 1098 aaPredicted RBP14.08□□□□□ -0.16
CCM2-217ENST00000492883 ARMC12Q5T9G4 340 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 SEL1L3Q68CR1 1132 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 ALG1LQ6GMV1 187 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 SLC23A3Q6PIS1 610 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 PID1Q7Z2X4 250 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 ADAT2Q7Z6V5 191 aaKnown RBP14.08□□□□□ -0.16
CCM2-217ENST00000492883 ZSWIM9Q86XI8 627 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 CDKL3Q8IVW4 592 aaPredicted RBP14.08□□□□□ -0.16
CCM2-217ENST00000492883 CXorf40AQ8TE69 158 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 ECHDC3Q96DC8 303 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 TEKT5Q96M29 485 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 QKIQ96PU8 341 aaKnown RBP eCLIP14.08□□□□□ -0.16
CCM2-217ENST00000492883 VAT1Q99536 393 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 CARD9Q9H257 536 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 C10orf88Q9H8K7 445 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 TM9SF3Q9HD45 589 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 PCDH12Q9NPG4 1184 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 AASDHPPTQ9NRN7 309 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 KLHL8Q9P2G9 620 aaPredicted RBP14.08□□□□□ -0.16
CCM2-217ENST00000492883 GGT7Q9UJ14 662 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 PHTF1Q9UMS5 762 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 ZFR2Q9UPR6 939 aaKnown RBP14.08□□□□□ -0.16
CCM2-217ENST00000492883 DMTF1Q9Y222 760 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 JRKLQ9Y4A0 524 aa14.08□□□□□ -0.16
CCM2-217ENST00000492883 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.08□□□□□ -0.16
CCM2-217ENST00000492883 IGLON5A6NGN9 336 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 C10orf142B7Z368 130 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 PRAMEF26H0Y7S4 382 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 ENC1O14682 589 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 RIOK3O14730 519 aaKnown RBP14.07□□□□□ -0.16
CCM2-217ENST00000492883 LATO43561 262 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 MMP20O60882 483 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 PGLSO95336 258 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 PAK4O96013 591 aaPredicted RBP14.07□□□□□ -0.16
CCM2-217ENST00000492883 CPP00450 1065 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 PRLRP16471 622 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 CA4P22748 312 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 NFKBIAP25963 317 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 HOXD11P31277 338 aaPredicted RBP14.07□□□□□ -0.16
CCM2-217ENST00000492883 CD86P42081 329 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 CSNK1EP49674 416 aaKnown RBP14.07□□□□□ -0.16
CCM2-217ENST00000492883 AFF3P51826 1226 aaKnown RBP14.07□□□□□ -0.16
CCM2-217ENST00000492883 ATXN3P54252 364 aaPredicted RBP14.07□□□□□ -0.16
CCM2-217ENST00000492883 RACK1P63244 317 aaKnown RBP14.07□□□□□ -0.16
CCM2-217ENST00000492883 SEMG2Q02383 582 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 WASHC5Q12768 1159 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 KLF1Q13351 362 aaPredicted RBP14.07□□□□□ -0.16
CCM2-217ENST00000492883 TMEM52BQ4KMG9 183 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 NAPEPLDQ6IQ20 393 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 ZSCAN30Q86W11 494 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 SLC13A5Q86YT5 568 aaPredicted RBP14.07□□□□□ -0.16
CCM2-217ENST00000492883 NDUFAF2Q8N183 169 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 C1orf216Q8TAB5 229 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 SKA1Q96BD8 255 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 SLC6A18Q96N87 628 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 ORAI3Q9BRQ5 295 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 WRAP53Q9BUR4 548 aaKnown RBP14.07□□□□□ -0.16
CCM2-217ENST00000492883 TLR10Q9BXR5 811 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 SLC17A9Q9BYT1 436 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 SLC25A51Q9H1U9 297 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 GLOD4Q9HC38 313 aa14.07□□□□□ -0.16
CCM2-217ENST00000492883 FSCN3Q9NQT6 498 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms