RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 HSPB7Q9UBY9 170 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 FAM90A8PA6NJQ4 464 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 LACTBL1A8MY62 500 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 HMGB1P1B2RPK0 211 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 BCAT2O15382 392 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 MT-CYBP00156 380 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 PRSS2P07478 247 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 HOXC6P09630 235 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 FAM90A13PP0C7W8 464 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 FAM90A24PP0C7X0 464 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 T-ENOLP0DO92 83 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 C21orf33P30042 268 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 ARRB2P32121 409 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 RPL3P39023 403 aaKnown RBP5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 RFX5P48382 616 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 HARS2P49590 506 aaKnown RBP5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 GNAQP50148 359 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 HTR6P50406 440 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 TRAF2Q12933 501 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 HNF4GQ14541 408 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 TCTN1Q2MV58 587 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 PRICKLE4Q2TBC4 344 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 KLHL24Q6TFL4 600 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 NEK10Q6ZWH5 1172 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 H1FNTQ75WM6 255 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 SLC46A3Q7Z3Q1 461 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 R3HCC1LQ7Z5L2 792 aaKnown RBP5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 FJX1Q86VR8 437 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 TDRPQ86YL5 185 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 TEX19Q8NA77 164 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 TRIB2Q92519 343 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 THOC3Q96J01 351 aaKnown RBP5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 TXNDC15Q96J42 360 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 ZNF570Q96NI8 536 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 WACQ9BTA9 647 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 PCDHA7Q9UN72 937 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 A4GNTQ9UNA3 340 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 RAI2Q9Y5P3 530 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 A3GALT2U3KPV4 340 aa5.06□□□□□ -1.6
HMGB1P38-201ENST00000490557 EIF3CLB5ME19 914 aaKnown RBP5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 SERPINI2O75830 405 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 NDUFB4O95168 129 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 RTN3O95197 1032 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 MBD4O95243 580 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 CD58P19256 250 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 EDN2P20800 178 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 HOXA11P31270 313 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 DDIT3P35638 169 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 GABRB2P47870 512 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 RARSP54136 660 aaKnown RBP5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 HLFQ16534 295 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 GSTA3Q16772 222 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 SOWAHAQ2M3V2 549 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 FAAH2Q6GMR7 532 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 GSTA5Q7RTV2 222 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 CADM4Q8NFZ8 388 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 SMARCE1Q969G3 411 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 FBXL8Q96CD0 374 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 MPP4Q96JB8 637 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 MMTAG2Q9BU76 263 aaKnown RBP5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 SEZ6LQ9BYH1 1024 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 ZHX3Q9H4I2 956 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 CISD1Q9NZ45 108 aaKnown RBP5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 OR6C3Q9NZP0 311 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 NAALADL1Q9UQQ1 740 aa5.05□□□□□ -1.6
HMGB1P38-201ENST00000490557 A0A1B0GVM2 712 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 TNFSF14O43557 240 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 TFP02787 698 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 HSPA1AP0DMV8 641 aaKnown RBP5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 HSPA1BP0DMV9 641 aaKnown RBP5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 ETFAP13804 333 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 EPHA8P29322 1005 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 CPOXP36551 454 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 AMTP48728 403 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 CCR9P51686 369 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 ABATP80404 500 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 ADORA2A-AS1P86434 159 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 CRYZQ08257 329 aaKnown RBP5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 CTTNQ14247 550 aaKnown RBP5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 NEDD9Q14511 834 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 PLCB4Q15147 1175 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 RNPS1Q15287 305 aaKnown RBP5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 TDRD12Q587J7 1177 aaKnown RBP5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 INO80CQ6PI98 192 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 SHFQ7M4L6 423 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 CPLX4Q7Z7G2 160 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 CNTROBQ8N137 903 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 UCMAQ8WVF2 138 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 RFFLQ8WZ73 363 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 LYZL4Q96KX0 146 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 PRKRIP1Q9H875 184 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 CLK4Q9HAZ1 481 aaKnown RBP5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 WNT16Q9UBV4 365 aa5.04□□□□□ -1.6
HMGB1P38-201ENST00000490557 IGHV4-28A0A0C4DH34 117 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 A0A0U1RQF3 1178 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 USP17L23D6RBM5 183 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 SNAP23O00161 211 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 SOX30O94993 753 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 VNN2O95498 520 aa5.03□□□□□ -1.6
HMGB1P38-201ENST00000490557 GLUD1P00367 558 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms