RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 APTXQ7Z2E3 356 aaKnown RBP17.73■□□□□ 0.43
NPHP4-209ENST00000489180 IRF2BP1Q8IU81 584 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 DENND1CQ8IV53 801 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 ENTPD4Q9Y227 616 aa17.73■□□□□ 0.43
NPHP4-209ENST00000489180 ERCC2P18074 760 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 CCNIQ14094 377 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 HYIQ5T013 277 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 CNSTQ6PJW8 725 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 AFTPHQ6ULP2 937 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 ARMC8Q8IUR7 673 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 ANKRD52Q8NB46 1076 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 TCF12Q99081 682 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 COMMD3-BMI1R4GMX3 469 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 ULK1O75385 1050 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 MPSTP25325 297 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 ZNF135P52742 658 aaPredicted RBP17.72■□□□□ 0.43
NPHP4-209ENST00000489180 POMGNT2Q8NAT1 580 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 PNPLA3Q9NST1 481 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 TP73O15350 636 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 ATP5C1P36542 298 aaKnown RBP17.72■□□□□ 0.43
NPHP4-209ENST00000489180 SLC7A2P52569 658 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 EPS8Q12929 822 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 PRAMEF19Q5SWL8 479 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 CERCAMQ5T4B2 595 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 NARS2Q96I59 477 aaKnown RBP17.72■□□□□ 0.43
NPHP4-209ENST00000489180 KREMEN1Q96MU8 473 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 MRPL45Q9BRJ2 306 aaKnown RBP17.72■□□□□ 0.43
NPHP4-209ENST00000489180 NDOR1Q9UHB4 597 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 RPLP2P05387 115 aaKnown RBP17.72■□□□□ 0.43
NPHP4-209ENST00000489180 CTPS1P17812 591 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 ZACNQ401N2 412 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 PALB2Q86YC2 1186 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 IQCKQ8N0W5 287 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 MSL3Q8N5Y2 521 aaKnown RBP17.72■□□□□ 0.43
NPHP4-209ENST00000489180 SLITRK2Q9H156 845 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 RSPH9Q9H1X1 276 aaPredicted RBP17.72■□□□□ 0.43
NPHP4-209ENST00000489180 PRDM16Q9HAZ2 1276 aa17.72■□□□□ 0.43
NPHP4-209ENST00000489180 MRPS7Q9Y2R9 242 aaKnown RBP17.72■□□□□ 0.43
NPHP4-209ENST00000489180 TIPRLO75663 272 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 CCNA2P20248 432 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 BTG3Q14201 252 aaPredicted RBP17.71■□□□□ 0.43
NPHP4-209ENST00000489180 SLC1A5Q15758 541 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 PAGE2BQ5JRK9 111 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 ATG14Q6ZNE5 492 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 RNF44Q7L0R7 432 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 FAM20CQ8IXL6 584 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.71■□□□□ 0.435e-8■■■■■ 204.6
NPHP4-209ENST00000489180 FAM13CQ8NE31 585 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 SPOCK2Q92563 424 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 HSFY1Q96LI6 401 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 ZYG11BQ9C0D3 744 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 RIC1Q4ADV7 1423 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 FAM47E-STBD1D6RA91 191 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 MTA1Q13330 715 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 SPIDRQ14159 915 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 CLN6Q9NWW5 311 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 RPS6KA6Q9UK32 745 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 CORO1CQ9ULV4 474 aaPredicted RBP17.71■□□□□ 0.43
NPHP4-209ENST00000489180 VWDEQ8N2E2 1590 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 AZIN1O14977 448 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 BPGMP07738 259 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 AKR1A1P14550 325 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 HNF4AP41235 474 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 EIF2B5Q13144 721 aaKnown RBP17.71■□□□□ 0.43
NPHP4-209ENST00000489180 TIMM50Q3ZCQ8 353 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 MAP1SQ66K74 1059 aaPredicted RBP17.71■□□□□ 0.43
NPHP4-209ENST00000489180 PIWIL4Q7Z3Z4 852 aaKnown RBP17.71■□□□□ 0.43
NPHP4-209ENST00000489180 HPS6Q86YV9 775 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 RASGEF1CQ8N431 466 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 SFRP1Q8N474 314 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 HSD17B14Q9BPX1 270 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 OSBPL11Q9BXB4 747 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 NOL11Q9H8H0 719 aaKnown RBP17.71■□□□□ 0.43
NPHP4-209ENST00000489180 C3orf18Q9UK00 162 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 GSTK1Q9Y2Q3 226 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 POLR1DQ9Y2S0 133 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 SNAP91O60641 907 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 HDAC10Q969S8 669 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 ZHX1-C8orf76Q96EF9 292 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 ADI1Q9BV57 179 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 NMUR2Q9GZQ4 415 aa17.71■□□□□ 0.43
NPHP4-209ENST00000489180 POLR3HQ9Y535 204 aaPredicted RBP17.71■□□□□ 0.43
NPHP4-209ENST00000489180 CXCL11O14625 94 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 GSC2O15499 205 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 MTA2O94776 668 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 ITGB5P18084 799 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 POLR2EP19388 210 aaKnown RBP17.7■□□□□ 0.42
NPHP4-209ENST00000489180 ITGAXP20702 1163 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 NTSP30990 170 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 TTKP33981 857 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 C4orf32Q8N8J7 132 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 GPR152Q8TDT2 470 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 PLGRKTQ9HBL7 147 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 VPS51Q9UID3 782 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 ENO2P09104 434 aaPredicted RBP17.7■□□□□ 0.42
NPHP4-209ENST00000489180 TAB1Q15750 504 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 PYDC2Q56P42 97 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 EEF1DP3Q658K8 133 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 SLC16A10Q8TF71 515 aa17.7■□□□□ 0.42
NPHP4-209ENST00000489180 LENG1Q96BZ8 264 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms