RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 UGP2Q16851 508 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 ARTNQ5T4W7 220 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 MARC1Q5VT66 337 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 TIGD7Q6NT04 549 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-232ENST00000489053 DBX2Q6ZNG2 339 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 GCNT7Q6ZNI0 430 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 RAB44Q7Z6P3 723 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-232ENST00000489053 ABI3BPQ7Z7G0 1075 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 SPATS2Q86XZ4 545 aaKnown RBP9.21□□□□□ -0.94
HDAC6-232ENST00000489053 CAMK1DQ8IU85 385 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 LRRC49Q8IUZ0 686 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 RHOT2Q8IXI1 618 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 NPWQ8N729 165 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 TSEN2Q8NCE0 465 aaKnown RBP9.21□□□□□ -0.94
HDAC6-232ENST00000489053 BTN2A2Q8WVV5 523 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 ASB12Q8WXK4 309 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 ZCCHC14Q8WYQ9 949 aaKnown RBP9.21□□□□□ -0.94
HDAC6-232ENST00000489053 GLMNQ92990 594 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 IFT43Q96FT9 208 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 PSKH2Q96QS6 385 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 DUSP23Q9BVJ7 150 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 C1QTNF2Q9BXJ5 285 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 SLC13A1Q9BZW2 595 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 NHEJ1Q9H9Q4 299 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-232ENST00000489053 PDFQ9HBH1 243 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 PCDH12Q9NPG4 1184 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 GGT7Q9UJ14 662 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 ATP8A1Q9Y2Q0 1164 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 MSRB2Q9Y3D2 182 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 MAP1BP46821 2468 aaKnown RBP9.2□□□□□ -0.94
HDAC6-232ENST00000489053 LRRD1A4D1F6 860 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 C1QTNF9BB2RNN3 333 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 RNF103O00237 685 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 TOR1BO14657 336 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 AREL1O15033 823 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 CPP00450 1065 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 C1SP09871 688 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 C1QTNF9P0C862 333 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 CYP2A6P11509 494 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-232ENST00000489053 TNNT1P13805 278 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 CTSEP14091 401 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 JUPP14923 745 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 TCF4P15884 667 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 JUNDP17535 347 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 CKMT2P17540 419 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 DGKAP23743 735 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 MAN1A1P33908 653 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 ARHGAP25P42331 645 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 NOP2P46087 812 aaKnown RBP9.2□□□□□ -0.94
HDAC6-232ENST00000489053 LIG3P49916 1009 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 BLKP51451 505 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 EPHB1P54762 984 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 SLC25A11Q02978 314 aaKnown RBP9.2□□□□□ -0.94
HDAC6-232ENST00000489053 ARHGEF7Q14155 803 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 ACOX1Q15067 660 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 ZNF542PQ5EBM4 170 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 FAXCQ5TGI0 409 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 AFMIDQ63HM1 303 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 DENND2CQ68D51 928 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 DHRS13Q6UX07 377 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 ARHGAP36Q6ZRI8 547 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 SLCO6A1Q86UG4 719 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 ARHGAP12Q8IWW6 846 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 CCNYQ8ND76 341 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 BAHD1Q8TBE0 780 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-232ENST00000489053 LMX1AQ8TE12 382 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 SCG3Q8WXD2 468 aaKnown RBP9.2□□□□□ -0.94
HDAC6-232ENST00000489053 LENG8Q96PV6 779 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-232ENST00000489053 IL12RB2Q99665 862 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 ZNF670Q9BS34 389 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 PACSIN1Q9BY11 444 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 POLR1EQ9GZS1 481 aaKnown RBP9.2□□□□□ -0.94
HDAC6-232ENST00000489053 ABCG4Q9H172 646 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 SPTLC3Q9NUV7 552 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 NCKIPSDQ9NZQ3 722 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 SPASTQ9UBP0 616 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 ADAMTS9Q9P2N4 1935 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 ANKRD11Q6UB99 2663 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-232ENST00000489053 CACNA1BQ00975 2339 aa9.2□□□□□ -0.94
HDAC6-232ENST00000489053 USP24Q9UPU5 2620 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 SPTY2D1-AS1A0A0U1RR47 76 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 GOLGA6CA6NDK9 693 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 GOLGA6BA6NDN3 693 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 POM121BA6NF01 834 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 GOLGA6L6A8MZA4 724 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 CACNB4O00305 520 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-232ENST00000489053 RAD51BO15315 384 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 SOCS5O75159 536 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 PIAS2O75928 621 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 KRT1P04264 644 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 PCCBP05166 539 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 GOLGA6DP0CG33 693 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 C6P13671 934 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 NME1P15531 152 aaKnown RBP9.19□□□□□ -0.94
HDAC6-232ENST00000489053 ZFXP17010 805 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-232ENST00000489053 CES1P23141 567 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 KELP23276 732 aa9.19□□□□□ -0.94
HDAC6-232ENST00000489053 CYLC1P35663 651 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-232ENST00000489053 TNNT3P45378 269 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-232ENST00000489053 RPIAP49247 311 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms