RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 PRLRP16471 622 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 TGM2P21980 687 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 CTNNA1P35221 906 aaKnown RBP13.01□□□□□ -0.33
PHF1-210ENST00000488767 ARRB1P49407 418 aaPredicted RBP13.01□□□□□ -0.33
PHF1-210ENST00000488767 RWDD2BP57060 319 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 COPS2P61201 443 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 AP1B1Q10567 949 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 UGP2Q16851 508 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 KIF19Q2TAC6 998 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 HLA-BQ31612 363 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 INAVAQ3KP66 663 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 MFSD7Q6UXD7 560 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 PEX26Q7Z412 305 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 RNF10Q8N5U6 811 aaKnown RBP13.01□□□□□ -0.33
PHF1-210ENST00000488767 PLD5Q8N7P1 536 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 P3H4Q92791 437 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 KLHDC7BQ96G42 594 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 LACRTQ9GZZ8 138 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 GOLPH3Q9H4A6 298 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 DNAAF2Q9NVR5 837 aaKnown RBP13.01□□□□□ -0.33
PHF1-210ENST00000488767 RBM22Q9NW64 420 aaKnown RBP eCLIP13.01□□□□□ -0.33
PHF1-210ENST00000488767 AMFRQ9UKV5 643 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 ATP8A1Q9Y2Q0 1164 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 DUSP10Q9Y6W6 482 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 GON4LQ3T8J9 2241 aa13.01□□□□□ -0.33
PHF1-210ENST00000488767 TSPAN11A1L157 253 aa13□□□□□ -0.33
PHF1-210ENST00000488767 RCCD1A6NED2 376 aa13□□□□□ -0.33
PHF1-210ENST00000488767 MIF4GDA9UHW6 222 aaKnown RBP13□□□□□ -0.33
PHF1-210ENST00000488767 TLR4O00206 839 aa13□□□□□ -0.33
PHF1-210ENST00000488767 RNF103O00237 685 aa13□□□□□ -0.33
PHF1-210ENST00000488767 MTSS1O43312 755 aa13□□□□□ -0.33
PHF1-210ENST00000488767 CST8O60676 142 aa13□□□□□ -0.33
PHF1-210ENST00000488767 TM7SF2O76062 418 aa13□□□□□ -0.33
PHF1-210ENST00000488767 PEX11BO96011 259 aa13□□□□□ -0.33
PHF1-210ENST00000488767 CCDC175P0C221 793 aa13□□□□□ -0.33
PHF1-210ENST00000488767 TIMP2P16035 220 aa13□□□□□ -0.33
PHF1-210ENST00000488767 CTNNA2P26232 953 aa13□□□□□ -0.33
PHF1-210ENST00000488767 ABL2P42684 1182 aa13□□□□□ -0.33
PHF1-210ENST00000488767 CDKN2BP42772 138 aa13□□□□□ -0.33
PHF1-210ENST00000488767 RGRP47804 291 aa13□□□□□ -0.33
PHF1-210ENST00000488767 CCT8P50990 548 aa13□□□□□ -0.33
PHF1-210ENST00000488767 FAM193AP78312 1265 aa13□□□□□ -0.33
PHF1-210ENST00000488767 PPIDQ08752 370 aaKnown RBP13□□□□□ -0.33
PHF1-210ENST00000488767 PPP2R5EQ16537 467 aa13□□□□□ -0.33
PHF1-210ENST00000488767 TAZQ16635 292 aa13□□□□□ -0.33
PHF1-210ENST00000488767 TMEM259Q4ZIN3 620 aa13□□□□□ -0.33
PHF1-210ENST00000488767 SEL1L3Q68CR1 1132 aa13□□□□□ -0.33
PHF1-210ENST00000488767 ERMP1Q7Z2K6 904 aa13□□□□□ -0.33
PHF1-210ENST00000488767 DCP2Q8IU60 420 aaKnown RBP13□□□□□ -0.33
PHF1-210ENST00000488767 TEX26Q8N6G2 289 aa13□□□□□ -0.33
PHF1-210ENST00000488767 ASB12Q8WXK4 309 aa13□□□□□ -0.33
PHF1-210ENST00000488767 MAML1Q92585 1016 aa13□□□□□ -0.33
PHF1-210ENST00000488767 KLK6Q92876 244 aa13□□□□□ -0.33
PHF1-210ENST00000488767 MYOCQ99972 504 aa13□□□□□ -0.33
PHF1-210ENST00000488767 ORAI3Q9BRQ5 295 aa13□□□□□ -0.33
PHF1-210ENST00000488767 EBF2Q9HAK2 575 aa13□□□□□ -0.33
PHF1-210ENST00000488767 NOD2Q9HC29 1040 aa13□□□□□ -0.33
PHF1-210ENST00000488767 PCDH12Q9NPG4 1184 aa13□□□□□ -0.33
PHF1-210ENST00000488767 SALL4Q9UJQ4 1053 aa13□□□□□ -0.33
PHF1-210ENST00000488767 ZFR2Q9UPR6 939 aaKnown RBP13□□□□□ -0.33
PHF1-210ENST00000488767 ITM2BQ9Y287 266 aa13□□□□□ -0.33
PHF1-210ENST00000488767 PCDHA3Q9Y5H8 950 aa13□□□□□ -0.33
PHF1-210ENST00000488767 SNX11Q9Y5W9 270 aa13□□□□□ -0.33
PHF1-210ENST00000488767 NUMA1Q14980 2115 aa13□□□□□ -0.33
PHF1-210ENST00000488767 DMXL1Q9Y485 3027 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 DCDC2BA2VCK2 349 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 IGLON5A6NGN9 336 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 A6NNZ2 444 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 AREL1O15033 823 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 MUSKO15146 869 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 PAK4O96013 591 aaPredicted RBP12.99□□□□□ -0.33
PHF1-210ENST00000488767 CPP00450 1065 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 ELFN1P0C7U0 828 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 ZNF883P0CG24 379 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 CTSKP43235 329 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 TNNT3P45378 269 aaPredicted RBP12.99□□□□□ -0.33
PHF1-210ENST00000488767 EPHB1P54762 984 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 MAXP61244 160 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 LRRC73Q5JTD7 316 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 ARMC12Q5T9G4 340 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 LAYNQ6UX15 382 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 USP45Q70EL2 814 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 PTAR1Q7Z6K3 402 aaPredicted RBP12.99□□□□□ -0.33
PHF1-210ENST00000488767 DENND6BQ8NEG7 585 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 TFB1MQ8WVM0 346 aaKnown RBP12.99□□□□□ -0.33
PHF1-210ENST00000488767 ECHDC3Q96DC8 303 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 LENG8Q96PV6 779 aaPredicted RBP12.99□□□□□ -0.33
PHF1-210ENST00000488767 ALS2CR12Q96Q35 445 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 LGMNQ99538 433 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 ELF4Q99607 663 aaPredicted RBP12.99□□□□□ -0.33
PHF1-210ENST00000488767 SEMA3CQ99985 751 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 WRAP53Q9BUR4 548 aaKnown RBP12.99□□□□□ -0.33
PHF1-210ENST00000488767 C1QTNF2Q9BXJ5 285 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 TM7SF3Q9NS93 570 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 SEPT10Q9P0V9 454 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 EFR3BQ9Y2G0 817 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 PCDHB9Q9Y5E1 797 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 ADGRG1Q9Y653 693 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 HS3ST3A1Q9Y663 406 aa12.99□□□□□ -0.33
PHF1-210ENST00000488767 hCG_1818297A0A087WSY0 165 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms