RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 MARCOQ9UEW3 520 aaPredicted RBP4.81□□□□□ -1.64
CDC42BPA-213ENST00000488131 CHORDC1Q9UHD1 332 aaPredicted RBP4.81□□□□□ -1.64
CDC42BPA-213ENST00000488131 SERPINB13Q9UIV8 391 aa4.81□□□□□ -1.64
CDC42BPA-213ENST00000488131 ENPP5Q9UJA9 477 aa4.81□□□□□ -1.64
CDC42BPA-213ENST00000488131 AGO2Q9UKV8 859 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-213ENST00000488131 PSME2Q9UL46 239 aa4.81□□□□□ -1.64
CDC42BPA-213ENST00000488131 DNPEPQ9ULA0 475 aa4.81□□□□□ -1.64
CDC42BPA-213ENST00000488131 EIF3LQ9Y262 564 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-213ENST00000488131 TESMINQ9Y4I5 508 aa4.81□□□□□ -1.64
CDC42BPA-213ENST00000488131 SNED1Q8TER0 1413 aa4.81□□□□□ -1.64
CDC42BPA-213ENST00000488131 DOT1LQ8TEK3 1739 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 EVPLLA8MZ36 301 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 WDR64B1ANS9 1081 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 PLOD2O00469 737 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 VWA5AO00534 786 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 MED24O75448 989 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 BANF1O75531 89 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 RFPL1O75677 317 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 KRT37O76014 449 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 SLITRK3O94933 977 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 SGPL1O95470 568 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 GSRP00390 522 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 SNRPAP09012 282 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 RALBP11234 206 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 ME2P23368 584 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 GRK2P25098 689 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 LTKP29376 864 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 PKLRP30613 574 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 IFNA8P32881 189 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 RFC1P35251 1148 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 GRIA3P42263 894 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 GPD2P43304 727 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 LEPRP48357 1165 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 NME5P56597 212 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 DYNLL1P63167 89 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 SPIRE1Q08AE8 756 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 TRAF2Q12933 501 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 KLF10Q13118 480 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 PRKG1Q13976 671 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 CEACAM7Q14002 265 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 CPSF6Q16630 551 aaKnown RBP eCLIP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 C15orf59Q2T9L4 293 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 INAVAQ3KP66 663 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 PPP6R3Q5H9R7 873 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 FNBP1LQ5T0N5 605 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 INTS11Q5TA45 600 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 NDUFAF5Q5TEU4 345 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 KAZNQ674X7 775 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 UGT3A1Q6NUS8 523 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 NSMFQ6X4W1 530 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 TAS2R42Q7RTR8 314 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 TFAP2DQ7Z6R9 452 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 ZC3H7AQ8IWR0 971 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 C7orf61Q8IZ16 206 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 KYQ8NBH2 561 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 SIMC1Q8NDZ2 872 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 TOR1AIP2Q8NFQ8 470 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 CMASQ8NFW8 434 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 ZNF384Q8TF68 577 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 CAPSLQ8WWF8 208 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 DDX1Q92499 740 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 CPT1BQ92523 772 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 PEX13Q92968 403 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 EXOC2Q96KP1 924 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 BTN2A3PQ96KV6 586 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 Q96M66 194 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 HEXIM2Q96MH2 286 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 UIMC1Q96RL1 719 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 APBA2Q99767 749 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 BCL7BQ9BQE9 202 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 TMEM121Q9BTD3 319 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 EFHD1Q9BUP0 239 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 HEMGNQ9BXL5 484 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 NAA50Q9GZZ1 169 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 ADAMTS10Q9H324 1103 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 RAD21L1Q9H4I0 556 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 RIOX1Q9H6W3 641 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 ATP13A3Q9H7F0 1226 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 POLR1BQ9H9Y6 1135 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 IFT122Q9HBG6 1241 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 GP6Q9HCN6 339 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 UBE2TQ9NPD8 197 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 ANLNQ9NQW6 1124 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 FBXO8Q9NRD0 319 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 PIM2Q9P1W9 311 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 ZMAT5Q9UDW3 170 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 KCNN3Q9UGI6 736 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 XPO7Q9UIA9 1087 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 MINPP1Q9UNW1 487 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 TCAF1Q9Y4C2 921 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 NUP98P52948 1817 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 LOXHD1Q8IVV2 1947 aa4.8□□□□□ -1.64
CDC42BPA-213ENST00000488131 SHANK3Q9BYB0 1731 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 CYP3A7-CYP3A51PA0A087WV96 503 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 C1orf232A0A0U1RR37 186 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 CCDC195A0A1B0GUA6 201 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 TCRBV3S1A0A5B6 114 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 FAM170AA1A519 330 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 ISPDA4D126 451 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms