RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 TMTC3Q6ZXV5 915 aa3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 TDRPQ86YL5 185 aa3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 FOXP4Q8IVH2 680 aaPredicted RBP3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 FAM185AQ8N0U4 392 aa3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 MMP21Q8N119 569 aa3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 TMEM199Q8N511 208 aa3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 SLC25A28Q96A46 364 aa3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 URB1-AS1Q96HZ7 61 aa3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 APOLD1Q96LR9 279 aa3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 MSTO1Q9BUK6 570 aa3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 ZHX3Q9H4I2 956 aa3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 DDX4Q9NQI0 724 aaKnown RBP3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 INTS6Q9UL03 887 aaKnown RBP3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 RAI2Q9Y5P3 530 aa3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 PSAT1Q9Y617 370 aa3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 HS3ST3B1Q9Y662 390 aa3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 SLC4A4Q9Y6R1 1079 aa3.01□□□□□ -1.93
R3HDM1-219ENST00000488035 A0A087X0M5 115 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 A0A096LPK6 155 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 IGLV5-39A0A0G2JS06 123 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 A0A0U1RQF3 1178 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 A0A1B0GX30 115 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 A0A1W2PQF6 199 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 C17orf102A2RUQ5 167 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 BECN2A8MW95 431 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 KLRF2D3W0D1 207 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 H0YGN5 161 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 GTPBP1O00178 669 aaKnown RBP3□□□□□ -1.93
R3HDM1-219ENST00000488035 LIASO43766 372 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 KLK8O60259 260 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 ATP2C2O75185 946 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 HOXB2P14652 356 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 POU1F1P28069 291 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 CDKN2AP42771 156 aaKnown RBP3□□□□□ -1.93
R3HDM1-219ENST00000488035 ME1P48163 572 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 POLD2P49005 469 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 CTCFP49711 727 aaPredicted RBP3□□□□□ -1.93
R3HDM1-219ENST00000488035 PMS2P54278 862 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 CDH12P55289 794 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 HDAC4P56524 1084 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 RPS3AP61247 264 aaKnown RBP3□□□□□ -1.93
R3HDM1-219ENST00000488035 YWHAZP63104 245 aaKnown RBP3□□□□□ -1.93
R3HDM1-219ENST00000488035 CEBPZQ03701 1054 aaKnown RBP3□□□□□ -1.93
R3HDM1-219ENST00000488035 PPATQ06203 517 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 TMEM115Q12893 351 aaPredicted RBP3□□□□□ -1.93
R3HDM1-219ENST00000488035 ESCO2Q56NI9 601 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 SLC45A4Q5BKX6 768 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 Q5PR19 223 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 HEPHL1Q6MZM0 1159 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 CES5AQ6NT32 575 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 PARM1Q6UWI2 310 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 Q6ZSV7 163 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 RRM2BQ7LG56 351 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 SLC46A3Q7Z3Q1 461 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 PXKQ7Z7A4 578 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 TBC1D26Q86UD7 250 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 ZDHHC23Q8IYP9 409 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 DCP1BQ8IZD4 617 aaKnown RBP3□□□□□ -1.93
R3HDM1-219ENST00000488035 NEXN-AS1Q8NBZ9 246 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 C11orf65Q8NCR3 313 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 MCPH1Q8NEM0 835 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 TMEM18Q96B42 140 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 WBP1Q96G27 269 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 WDFY2Q96P53 400 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 BARD1Q99728 777 aaKnown RBP3□□□□□ -1.93
R3HDM1-219ENST00000488035 ITPAQ9BY32 194 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 RANBP17Q9H2T7 1088 aaKnown RBP3□□□□□ -1.93
R3HDM1-219ENST00000488035 SLCO5A1Q9H2Y9 848 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 PLEKHA4Q9H4M7 779 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 SIRT3Q9NTG7 399 aaPredicted RBP3□□□□□ -1.93
R3HDM1-219ENST00000488035 DECR2Q9NUI1 292 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 SPATS2LQ9NUQ6 558 aaKnown RBP3□□□□□ -1.93
R3HDM1-219ENST00000488035 MAP3K20Q9NYL2 800 aaKnown RBP3□□□□□ -1.93
R3HDM1-219ENST00000488035 SCINQ9Y6U3 715 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 TTC3P53804 2025 aa3□□□□□ -1.93
R3HDM1-219ENST00000488035 PI4KAP2A4QPH2 592 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 BCAT2O15382 392 aaPredicted RBP2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 MLYCDO95822 493 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 PSG1P11464 419 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 ITGAXP20702 1163 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 CPOXP36551 454 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 GPR12P47775 334 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 ALDH7A1P49419 539 aaKnown RBP2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 FAM27E3Q08E93 113 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 RUNX2Q13950 521 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 HNF4GQ14541 408 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 LPIN1Q14693 890 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 PTGR1Q14914 329 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 VEPH1Q14D04 833 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 PPP2R5BQ15173 497 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 MED22Q15528 200 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 SOWAHAQ2M3V2 549 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 COL28A1Q2UY09 1125 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 PRTGQ2VWP7 1150 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 PLEKHO1Q53GL0 409 aaPredicted RBP2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 WASHC2DQ5SRD0 308 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 MANEAQ5SRI9 462 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 PRAMEF19Q5SWL8 479 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 HYIQ5T013 277 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms