RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 VPS4BO75351 444 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 ATP6V1B1P15313 513 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 DYNC1I2Q13409 638 aaKnown RBP11.89□□□□□ -0.51
TRA2B-214ENST00000487615 KRT33BQ14525 404 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 ATP6AP1LQ52LC2 224 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 VWA5B1Q5TIE3 1220 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 PRMT9Q6P2P2 845 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 ZYG11AQ6WRX3 759 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 SMG8Q8ND04 991 aaKnown RBP11.89□□□□□ -0.51
TRA2B-214ENST00000487615 METTL6Q8TCB7 284 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 TMEM40Q8WWA1 233 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 CYGBQ8WWM9 190 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 RNF208Q9H0X6 261 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 WARS2Q9UGM6 360 aaKnown RBP11.89□□□□□ -0.51
TRA2B-214ENST00000487615 PACSIN3Q9UKS6 424 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 AGO1Q9UL18 857 aaKnown RBP11.89□□□□□ -0.51
TRA2B-214ENST00000487615 SNX5Q9Y5X3 404 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 SCAMP3O14828 347 aaKnown RBP11.89□□□□□ -0.51
TRA2B-214ENST00000487615 IGSF6O95976 241 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 LPOP22079 712 aaPredicted RBP11.89□□□□□ -0.51
TRA2B-214ENST00000487615 CCNG1P51959 295 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 PLIN5Q00G26 463 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 BTKQ06187 659 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 GALNT2Q10471 571 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 BIRC2Q13490 618 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 SQLEQ14534 574 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 DEFB115Q30KQ5 88 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 RINLQ6ZS11 566 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 CTU1Q7Z7A3 348 aaKnown RBP11.89□□□□□ -0.51
TRA2B-214ENST00000487615 DENND6AQ8IWF6 608 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 GSTCDQ8NEC7 633 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 RCN3Q96D15 328 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 ZNF558Q96NG5 402 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 HGH1Q9BTY7 390 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 SEMA4BQ9NPR2 832 aaPredicted RBP11.89□□□□□ -0.51
TRA2B-214ENST00000487615 ADAMTSL1Q8N6G6 1762 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 PHIPQ8WWQ0 1821 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 CLDN11O75508 207 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 PSMC3P17980 439 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 LBPP18428 481 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 ATP6V1C1P21283 382 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 TRIP4Q15650 581 aaPredicted RBP11.89□□□□□ -0.51
TRA2B-214ENST00000487615 HECTD2Q5U5R9 776 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 FUT10Q6P4F1 479 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 DHFR2Q86XF0 187 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 LRRC43Q8N309 656 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 FNDC5Q8NAU1 212 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 HMCESQ96FZ2 354 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 SENP6Q9GZR1 1112 aaPredicted RBP11.89□□□□□ -0.51
TRA2B-214ENST00000487615 R3HDMLQ9H3Y0 253 aa11.89□□□□□ -0.51
TRA2B-214ENST00000487615 RGS17Q9UGC6 210 aaPredicted RBP11.89□□□□□ -0.51
TRA2B-214ENST00000487615 PRPF19Q9UMS4 504 aaKnown RBP11.89□□□□□ -0.51
TRA2B-214ENST00000487615 ABLIM1O14639 778 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 GUCA1CO95843 209 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 TSPAN8P19075 237 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 TACR2P21452 398 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 ABL2P42684 1182 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 SMAD3P84022 425 aaKnown RBP11.88□□□□□ -0.51
TRA2B-214ENST00000487615 GTF2H3Q13889 308 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 KIAA0930Q6ICG6 404 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-214ENST00000487615 AAGABQ6PD74 315 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 DHDDSQ86SQ9 333 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 ZNF781Q8N8C0 355 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 TNIP2Q8NFZ5 429 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 TRPC4APQ8TEL6 797 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 ACOX2Q99424 681 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 CCT7Q99832 543 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 MTIF3Q9H2K0 278 aaKnown RBP11.88□□□□□ -0.51
TRA2B-214ENST00000487615 ACTR8Q9H981 624 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 LNPEPQ9UIQ6 1025 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 SYNCRIPO60506 623 aaKnown RBP11.88□□□□□ -0.51
TRA2B-214ENST00000487615 BEST1O76090 585 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 IPO13O94829 963 aaKnown RBP11.88□□□□□ -0.51
TRA2B-214ENST00000487615 SNRPB2P08579 225 aaKnown RBP11.88□□□□□ -0.51
TRA2B-214ENST00000487615 HDCP19113 662 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 CES1P23141 567 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 PBX3P40426 434 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 ACLYP53396 1101 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 GJA9P57773 515 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 SLC10A2Q12908 348 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-214ENST00000487615 TSTD2Q5T7W7 516 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 ZBTB49Q6ZSB9 765 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 FSTL5Q8N475 847 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-214ENST00000487615 DENND1AQ8TEH3 1009 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 CASP10Q92851 521 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 CAAP1Q9H8G2 361 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 TMEM39AQ9NV64 488 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 ZNF358Q9NW07 568 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 ATP6AP2A0A1C7CYW4 349 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 MBLAC1A4D2B0 266 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-214ENST00000487615 MOXD2PA6NHM9 499 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 CCNT2O60583 730 aaKnown RBP11.88□□□□□ -0.51
TRA2B-214ENST00000487615 ATP6AP2O75787 350 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 NDST3O95803 873 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 CDC25CP30307 473 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 TAS2R39P59534 338 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 WLSQ5T9L3 541 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 TIFABQ6ZNK6 161 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 PSMG2Q969U7 264 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 FAM162AQ96A26 154 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms