RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 HEXAP06865 529 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 IFIT1P09914 478 aaKnown RBP4.27□□□□□ -1.73
LINC00888-204ENST00000487386 CBSLP0DN79 551 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 TGFB3P10600 412 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 C21orf33P30042 268 aaPredicted RBP4.27□□□□□ -1.73
LINC00888-204ENST00000487386 CBSP35520 551 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 ART1P52961 327 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 KRTAP10-9P60411 292 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 TRPC3Q13507 836 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 TDGQ13569 410 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 CAMK1Q14012 370 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 NFATC4Q14934 902 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 PRICKLE4Q2TBC4 344 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 FAM69BQ5VUD6 431 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 CAPRIN2Q6IMN6 1127 aaKnown RBP4.27□□□□□ -1.73
LINC00888-204ENST00000487386 C16orf82Q7Z2V1 217 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 ARMC9Q7Z3E5 817 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 TADA2BQ86TJ2 420 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 LURAP1LQ8IV03 231 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 SMAP1Q8IYB5 467 aaPredicted RBP4.27□□□□□ -1.73
LINC00888-204ENST00000487386 CCDC105Q8IYK2 499 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 TCP11L2Q8N4U5 519 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 C11orf65Q8NCR3 313 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 GJC3Q8NFK1 279 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 ARRDC2Q8TBH0 407 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 TMED6Q8WW62 240 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 TXNDC15Q96J42 360 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 CYSLTR2Q9NS75 346 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 PPP1R14DQ9NXH3 145 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 HSPB7Q9UBY9 170 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 TBX20Q9UMR3 447 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 NFE2L3Q9Y4A8 694 aa4.27□□□□□ -1.73
LINC00888-204ENST00000487386 LINC01553A4QN01 128 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 ATP2C2O75185 946 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 RGS11O94810 467 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 ZBTB11O95625 1053 aaPredicted RBP4.26□□□□□ -1.73
LINC00888-204ENST00000487386 PYGLP06737 847 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 HNRNPA1P09651 372 aaKnown RBP eCLIP4.26□□□□□ -1.73
LINC00888-204ENST00000487386 TFPIP10646 304 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 PCNAP12004 261 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 EDN2P20800 178 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 MAPK9P45984 424 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 EFNA5P52803 228 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 GRSF1Q12849 480 aaKnown RBP eCLIP4.26□□□□□ -1.73
LINC00888-204ENST00000487386 TAF11Q15544 211 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 HLFQ16534 295 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 BAK1Q16611 211 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 TYW3Q6IPR3 259 aaKnown RBP4.26□□□□□ -1.73
LINC00888-204ENST00000487386 TMEM81Q6P7N7 255 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 SLC22A25Q6T423 547 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 KLHL24Q6TFL4 600 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 PRSS57Q6UWY2 283 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 C18orf65Q6ZTR6 163 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 ZNF114Q8NC26 417 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 HTRA1Q92743 480 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 HVCN1Q96D96 273 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 APOPT1Q96IL0 206 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 LRFN5Q96NI6 719 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 FIZ1Q96SL8 496 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 C6orf106Q9H6K1 298 aaPredicted RBP4.26□□□□□ -1.73
LINC00888-204ENST00000487386 SMYD2Q9NRG4 433 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 OCIAD1Q9NX40 245 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 PDP2Q9P2J9 529 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 CARD8Q9Y2G2 431 aa4.26□□□□□ -1.73
LINC00888-204ENST00000487386 CPED1A4D0V7 1026 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 BTBD18B2RXH4 712 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 PRSS44E7EML9 344 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 HSPA12AO43301 675 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 NDUFB4O95168 129 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 GALTP07902 379 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 RPL3P39023 403 aaKnown RBP4.25□□□□□ -1.73
LINC00888-204ENST00000487386 COMPP49747 757 aaPredicted RBP4.25□□□□□ -1.73
LINC00888-204ENST00000487386 UFM1P61960 85 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 TUBA1BP68363 451 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 RUNX2Q13950 521 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 ARHGEF6Q15052 776 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 C9orf57Q5W0N0 161 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 TXNDC8Q6A555 127 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 CES5AQ6NT32 575 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 NEK10Q6ZWH5 1172 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 CREB3L2Q70SY1 520 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 GPAT4Q86UL3 456 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 KIAA2013Q8IYS2 634 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 DCP1BQ8IZD4 617 aaKnown RBP4.25□□□□□ -1.73
LINC00888-204ENST00000487386 PARP16Q8N5Y8 322 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 OTULINQ96BN8 352 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 RTP4Q96DX8 246 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 MXRA8Q9BRK3 442 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 GAREM1Q9H706 876 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 WASH6PQ9NQA3 447 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 WIZO95785 1651 aa4.25□□□□□ -1.73
LINC00888-204ENST00000487386 SMARCA2P51531 1590 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 MROH2BQ7Z745 1585 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 CCDC196A0A1B0GTZ2 297 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 A0A1B0GUV1 79 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 A0A1W2PQM1 296 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 PRR23D1E9PI22 279 aaPredicted RBP4.24□□□□□ -1.73
LINC00888-204ENST00000487386 TNPO2O14787 897 aaKnown RBP4.24□□□□□ -1.73
LINC00888-204ENST00000487386 TACC1O75410 805 aa4.24□□□□□ -1.73
LINC00888-204ENST00000487386 CH25HO95992 272 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms