RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 APOPT1Q96IL0 206 aa7.11□□□□□ -1.27
SF3A3-206ENST00000487062 CABS1Q96KC9 395 aa7.11□□□□□ -1.27
SF3A3-206ENST00000487062 FCRL3Q96P31 734 aaPredicted RBP7.11□□□□□ -1.27
SF3A3-206ENST00000487062 RBBP8Q99708 897 aa7.11□□□□□ -1.27
SF3A3-206ENST00000487062 TRIM56Q9BRZ2 755 aaKnown RBP7.11□□□□□ -1.27
SF3A3-206ENST00000487062 FAM167BQ9BTA0 163 aa7.11□□□□□ -1.27
SF3A3-206ENST00000487062 BBS2Q9BXC9 721 aa7.11□□□□□ -1.27
SF3A3-206ENST00000487062 ADGRE3Q9BY15 652 aa7.11□□□□□ -1.27
SF3A3-206ENST00000487062 SLC2A11Q9BYW1 496 aa7.11□□□□□ -1.27
SF3A3-206ENST00000487062 NSRP1Q9H0G5 558 aaKnown RBP7.11□□□□□ -1.27
SF3A3-206ENST00000487062 CCDC134Q9H6E4 229 aa7.11□□□□□ -1.27
SF3A3-206ENST00000487062 NOD2Q9HC29 1040 aa7.11□□□□□ -1.27
SF3A3-206ENST00000487062 IARS2Q9NSE4 1012 aaKnown RBP7.11□□□□□ -1.27
SF3A3-206ENST00000487062 ABCB8Q9NUT2 735 aa7.11□□□□□ -1.27
SF3A3-206ENST00000487062 PLK2Q9NYY3 685 aa7.11□□□□□ -1.27
SF3A3-206ENST00000487062 LHX3Q9UBR4 397 aa7.11□□□□□ -1.27
SF3A3-206ENST00000487062 RIMKLBQ9ULI2 386 aa7.11□□□□□ -1.27
SF3A3-206ENST00000487062 CCL26Q9Y258 94 aa7.11□□□□□ -1.27
SF3A3-206ENST00000487062 MYOFQ9NZM1 2061 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 TTC24A2A3L6 582 aaPredicted RBP7.1□□□□□ -1.27
SF3A3-206ENST00000487062 FOXO6A8MYZ6 492 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 NEDD8-MDP1E9PL57 170 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 NRG2O14511 850 aaPredicted RBP7.1□□□□□ -1.27
SF3A3-206ENST00000487062 SLC7A4O43246 635 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 TYROBPO43914 113 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 UGT1A9O60656 530 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 PRAMEF12O95522 483 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 CRTAMO95727 393 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 CD160O95971 181 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 IGSF6O95976 241 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 PENKP01210 267 aaPredicted RBP7.1□□□□□ -1.27
SF3A3-206ENST00000487062 ITGA2BP08514 1039 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 ATXN1LP0C7T5 689 aaKnown RBP7.1□□□□□ -1.27
SF3A3-206ENST00000487062 PABPC1P11940 636 aaKnown RBP7.1□□□□□ -1.27
SF3A3-206ENST00000487062 TYRP14679 529 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 FSHRP23945 695 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 CD70P32970 193 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 BMP8BP34820 402 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 CCNFP41002 786 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 CHRNA4P43681 627 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 CCT5P48643 541 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 CSNK1DP48730 415 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 POLD2P49005 469 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 NUMBP49757 651 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 SERPINB8P50452 374 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 BMPR2Q13873 1038 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 HSP90AA5PQ58FG0 334 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 PITRM1Q5JRX3 1037 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 RARS2Q5T160 578 aaKnown RBP7.1□□□□□ -1.27
SF3A3-206ENST00000487062 MROH9Q5TGP6 573 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 ESRP1Q6NXG1 681 aaKnown RBP7.1□□□□□ -1.27
SF3A3-206ENST00000487062 NCEH1Q6PIU2 408 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 LYPD8Q6UX82 237 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 LINGO4Q6UY18 593 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 CPLX4Q7Z7G2 160 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 RETREG3Q86VR2 466 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 TMEM25Q86YD3 366 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 UNC5BQ8IZJ1 945 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 APCDD1Q8J025 514 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 PAF1Q8N7H5 531 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 C12orf76Q8N812 135 aaPredicted RBP7.1□□□□□ -1.27
SF3A3-206ENST00000487062 BANPQ8N9N5 519 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 VN1R2Q8NFZ6 395 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 BRSK1Q8TDC3 778 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 BLOC1S5Q8TDH9 187 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 BCAS4Q8TDM0 211 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 STYXQ8WUJ0 223 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 CKAP2Q8WWK9 683 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 ATXN2LQ8WWM7 1075 aaKnown RBP7.1□□□□□ -1.27
SF3A3-206ENST00000487062 PTPRN2Q92932 1015 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 CHMP6Q96FZ7 201 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 EXOC2Q96KP1 924 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 MAGEB18Q96M61 343 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 ZSWIM3Q96MP5 696 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 TRIB3Q96RU7 358 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 SRPK1Q96SB4 655 aaKnown RBP7.1□□□□□ -1.27
SF3A3-206ENST00000487062 PAIP2Q9BPZ3 127 aaKnown RBP7.1□□□□□ -1.27
SF3A3-206ENST00000487062 TDRD1Q9BXT4 1180 aaKnown RBP7.1□□□□□ -1.27
SF3A3-206ENST00000487062 NSUN3Q9H649 340 aaKnown RBP7.1□□□□□ -1.27
SF3A3-206ENST00000487062 IGFLR1Q9H665 355 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 UGT1A7Q9HAW7 530 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 UGT1A10Q9HAW8 530 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 UGT1A8Q9HAW9 530 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 TREX1Q9NSU2 369 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 MKS1Q9NXB0 559 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 GDE1Q9NZC3 331 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.1□□□□□ -1.27
SF3A3-206ENST00000487062 HACD3Q9P035 362 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 MARK1Q9P0L2 795 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 GGA2Q9UJY4 613 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 CHKBQ9Y259 395 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 RAI2Q9Y5P3 530 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 ACTL7AQ9Y615 435 aa7.1□□□□□ -1.27
SF3A3-206ENST00000487062 CCDC78A2IDD5 438 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 MROH6A6NGR9 719 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 C2orf81A6NN90 581 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 GOLGA8RI6L899 631 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 NDUFAB1O14561 156 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 SIN3BO75182 1162 aa7.09□□□□□ -1.27
SF3A3-206ENST00000487062 GLRA3O75311 464 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms