RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 TRAF2Q12933 501 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 TDGQ13569 410 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 TTMPQ5BVD1 217 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 TMEM196Q5HYL7 178 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 BMP8AQ7Z5Y6 402 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 IGDCC3Q8IVU1 814 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 IPMKQ8NFU5 416 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 OR52K1Q8NGK4 314 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 OR2A12Q8NGT7 310 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 PTPRN2Q92932 1015 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 PGM2Q96G03 612 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 FEM1CQ96JP0 617 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 P2RY13Q9BPV8 354 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 TBL1YQ9BQ87 522 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 APOL2Q9BQE5 337 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 FICDQ9BVA6 458 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 CAPS2Q9BXY5 557 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 IRF2BPLQ9H1B7 796 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 CDC42EP4Q9H3Q1 356 aaKnown RBP11.43□□□□□ -0.58
SND1-212ENST00000485871 C8orf33Q9H7E9 229 aaPredicted RBP11.43□□□□□ -0.58
SND1-212ENST00000485871 CNOT10Q9H9A5 744 aaKnown RBP11.43□□□□□ -0.58
SND1-212ENST00000485871 PLAC1Q9HBJ0 212 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 XAB2Q9HCS7 855 aaKnown RBP11.43□□□□□ -0.58
SND1-212ENST00000485871 SCUBE2Q9NQ36 999 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 FAM86C1Q9NVL1 165 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 HAUS2Q9NVX0 235 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 THAP10Q9P2Z0 257 aaPredicted RBP11.43□□□□□ -0.58
SND1-212ENST00000485871 EVLQ9UI08 416 aaPredicted RBP11.43□□□□□ -0.58
SND1-212ENST00000485871 DUSP12Q9UNI6 340 aa11.43□□□□□ -0.58
SND1-212ENST00000485871 TBC1D3BA6NDS4 549 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 TMEM221A6NGB7 291 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 M0R296 226 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 TRAFD1O14545 582 aaPredicted RBP11.42□□□□□ -0.58
SND1-212ENST00000485871 HTRA2O43464 458 aaPredicted RBP11.42□□□□□ -0.58
SND1-212ENST00000485871 IGSF6O95976 241 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 APODP05090 189 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 GLULP15104 373 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 KIR2DL1P43626 348 aaPredicted RBP11.42□□□□□ -0.58
SND1-212ENST00000485871 CCNHP51946 323 aaPredicted RBP11.42□□□□□ -0.58
SND1-212ENST00000485871 PDIA2Q13087 525 aaKnown RBP11.42□□□□□ -0.58
SND1-212ENST00000485871 MTM1Q13496 603 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 ZNF234Q14588 700 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 SLC1A5Q15758 541 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 PCSK7Q16549 785 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 KRT71Q3SY84 523 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 PREPLQ4J6C6 727 aaPredicted RBP11.42□□□□□ -0.58
SND1-212ENST00000485871 CARD16Q5EG05 197 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 EGFLAMQ63HQ2 1017 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 FSTL4Q6MZW2 842 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 DPY19L3Q6ZPD9 716 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 Q6ZVU0 165 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 CENPUQ71F23 418 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 LINC00523Q86TU6 105 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 MPP5Q8N3R9 675 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 OR6K2Q8NGY2 324 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 SPOCK2Q92563 424 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 ATOH1Q92858 354 aaPredicted RBP11.42□□□□□ -0.58
SND1-212ENST00000485871 ARL8AQ96BM9 186 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 ECHDC3Q96DC8 303 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 TTC25Q96NG3 672 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 CPEB1Q9BZB8 566 aaKnown RBP11.42□□□□□ -0.58
SND1-212ENST00000485871 SEMA4AQ9H3S1 761 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 MTG2Q9H4K7 406 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 PPCSQ9HAB8 311 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 SAYSD1Q9NPB0 183 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 NINJ2Q9NZG7 142 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 PIAS3Q9Y6X2 628 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 ZDBF2Q9HCK1 2354 aa11.42□□□□□ -0.58
SND1-212ENST00000485871 CACNA1AO00555 2505 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.41□□□□□ -0.58
SND1-212ENST00000485871 SOCS5O75159 536 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 NDST3O95803 873 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 PDHA1P08559 390 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 PRKCHP24723 683 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 MGAT1P26572 445 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 GKP32189 559 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 ELK3P41970 407 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 IL12RB1P42701 662 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 MAGEA4P43358 317 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 TNFRSF4P43489 277 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 MAPK8P45983 427 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 GYS2P54840 703 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 SNRPD1P62314 119 aaKnown RBP11.41□□□□□ -0.58
SND1-212ENST00000485871 SARNPP82979 210 aaKnown RBP11.41□□□□□ -0.58
SND1-212ENST00000485871 PFKPQ01813 784 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 CDK18Q07002 472 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 CDH17Q12864 832 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 TCF15Q12870 199 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 MYLK3Q32MK0 819 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 HNRNPA1L2Q32P51 320 aaKnown RBP11.41□□□□□ -0.58
SND1-212ENST00000485871 BBS9Q3SYG4 887 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 SIRPB2Q5JXA9 342 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 TRIM67Q6ZTA4 783 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 CCDC25Q86WR0 208 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 ZSWIM9Q86XI8 627 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 PDIK1LQ8N165 341 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 CHST14Q8NCH0 376 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 LRRC39Q96DD0 335 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 MSANTD3Q96H12 275 aa11.41□□□□□ -0.58
SND1-212ENST00000485871 TUBGCP5Q96RT8 1024 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms