RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 FAM217AQ8IXS0 508 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMC4-217ENST00000485867 FBXO18Q8NFZ0 1043 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 WDR36Q8NI36 951 aaKnown RBP6.82□□□□□ -1.32
SMC4-217ENST00000485867 IFI44Q8TCB0 444 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 NOC3LQ8WTT2 800 aaKnown RBP6.82□□□□□ -1.32
SMC4-217ENST00000485867 DDI1Q8WTU0 396 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 HTR3CQ8WXA8 447 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 RAD54LQ92698 747 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 ACCSQ96QU6 501 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 DCLK3Q9C098 648 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 CAAP1Q9H8G2 361 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 USP29Q9HBJ7 922 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 CSNK1G1Q9HCP0 422 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 ABCB8Q9NUT2 735 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 AGO1Q9UL18 857 aaKnown RBP6.82□□□□□ -1.32
SMC4-217ENST00000485867 EXOC7Q9UPT5 735 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 TRPM6Q9BX84 2022 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 SETD2Q9BYW2 2564 aaPredicted RBP6.82□□□□□ -1.32
SMC4-217ENST00000485867 SDK2Q58EX2 2172 aa6.82□□□□□ -1.32
SMC4-217ENST00000485867 CCDC187A0A096LP49 1063 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 VWA3AA6NCI4 1184 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 HHLA1C9JL84 531 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 SLC26A4O43511 780 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 RNASEH1O60930 286 aaKnown RBP6.81□□□□□ -1.32
SMC4-217ENST00000485867 PIAS2O75928 621 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 THEGLP0DJG4 465 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 PABPC1P11940 636 aaKnown RBP6.81□□□□□ -1.32
SMC4-217ENST00000485867 CCDC130P13994 396 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 WT1P19544 449 aaPredicted RBP6.81□□□□□ -1.32
SMC4-217ENST00000485867 SLC5A2P31639 672 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 L1CAMP32004 1257 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 SLC8A1P32418 973 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 HARS2P49590 506 aaKnown RBP6.81□□□□□ -1.32
SMC4-217ENST00000485867 PDX1P52945 283 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 MAP3K7CLP57077 242 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 KRTAP10-2P60368 255 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 COG7P83436 770 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 POU4F1Q01851 419 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 NCAPHQ15003 741 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 VWA3BQ502W6 1294 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 MBLAC2Q68D91 279 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 RBM44Q6ZP01 1051 aaKnown RBP6.81□□□□□ -1.32
SMC4-217ENST00000485867 SCD5Q86SK9 330 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 WDR49Q8IV35 697 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 DENND1CQ8IV53 801 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 MMAAQ8IVH4 418 aaKnown RBP6.81□□□□□ -1.32
SMC4-217ENST00000485867 AHI1Q8N157 1196 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 GPD1LQ8N335 351 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 ZNF276Q8N554 614 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 AADATQ8N5Z0 425 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 WFDC5Q8TCV5 224 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 RNF34Q969K3 372 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 ARRDC3Q96B67 414 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 TNIP3Q96KP6 325 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 OMDQ99983 421 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 ADNPQ9H2P0 1102 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 PCIF1Q9H4Z3 704 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 SMYD3Q9H7B4 428 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 KLHL11Q9NVR0 708 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 NLGN3Q9NZ94 848 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 ARHGAP20Q9P2F6 1191 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 RASAL2Q9UJF2 1139 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 ANAPC2Q9UJX6 822 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 GGA2Q9UJY4 613 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 DMTF1Q9Y222 760 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 PCDHGA7Q9Y5G6 932 aa6.81□□□□□ -1.32
SMC4-217ENST00000485867 UBE4BO95155 1302 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.8□□□□□ -1.32
SMC4-217ENST00000485867 A0A1W2PQJ5 194 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 ZC3H12DA2A288 527 aaKnown RBP6.8□□□□□ -1.32
SMC4-217ENST00000485867 K7ESM1 405 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 TCEA3O75764 348 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 PLA2G1BP04054 148 aaKnown RBP6.8□□□□□ -1.32
SMC4-217ENST00000485867 ATP5BP06576 529 aaKnown RBP6.8□□□□□ -1.32
SMC4-217ENST00000485867 ALPPL2P10696 532 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 LIPCP11150 499 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 GOT1P17174 413 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 POLR2EP19388 210 aaKnown RBP6.8□□□□□ -1.32
SMC4-217ENST00000485867 TACR1P25103 407 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 MAT2AP31153 395 aaKnown RBP6.8□□□□□ -1.32
SMC4-217ENST00000485867 NUDT1P36639 197 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 PSMD8P48556 350 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 CASP5P51878 434 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 MYL6P60660 151 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 CYP4F2P78329 520 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 IRX6P78412 446 aaPredicted RBP6.8□□□□□ -1.32
SMC4-217ENST00000485867 PRR5P85299 388 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 EFEMP1Q12805 493 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 ZNF177Q13360 481 aaPredicted RBP6.8□□□□□ -1.32
SMC4-217ENST00000485867 MORC3Q14149 939 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 STAT4Q14765 748 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 TCEAL1Q15170 157 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 SURF1Q15526 300 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 HNRNPA1L2Q32P51 320 aaKnown RBP6.8□□□□□ -1.32
SMC4-217ENST00000485867 MPPE1Q53F39 396 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 C9orf64Q5T6V5 341 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 GUSBP11Q6P575 273 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 CCDC186Q7Z3E2 898 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 C14orf80Q86SX3 495 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms