RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 PRPF39Q86UA1 669 aaKnown RBP11.98□□□□□ -0.49
APTX-227ENST00000485479 PLPP6Q8IY26 295 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 RGL4Q8IZJ4 473 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 SLC35B2Q8TB61 432 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 TCEAL3Q969E4 200 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 BIRC7Q96CA5 298 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 GORASP1Q9BQQ3 440 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 CPEB1Q9BZB8 566 aaKnown RBP11.98□□□□□ -0.49
APTX-227ENST00000485479 USP29Q9HBJ7 922 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 EIF2B4Q9UI10 523 aaKnown RBP11.98□□□□□ -0.49
APTX-227ENST00000485479 ZKSCAN5Q9Y2L8 839 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 COQ6Q9Y2Z9 468 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 RAI2Q9Y5P3 530 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 TNRC6BQ9UPQ9 1833 aaKnown RBP11.98□□□□□ -0.49
APTX-227ENST00000485479 MEI4A8MW99 385 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 NEMP1O14524 444 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 PMPCBO75439 489 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 IFNB1P01574 187 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 ZSCAN5DPP0CG00 497 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 TIMP2P16035 220 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 PSMB4P28070 264 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 AP1S1P61966 158 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 FAM193AP78312 1265 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 ELF2Q15723 593 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 UGP2Q16851 508 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 DENND2CQ68D51 928 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 LPCAT2Q7L5N7 544 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 CDKL3Q8IVW4 592 aaPredicted RBP11.98□□□□□ -0.49
APTX-227ENST00000485479 OXNAD1Q96HP4 312 aaPredicted RBP11.98□□□□□ -0.49
APTX-227ENST00000485479 TEKT5Q96M29 485 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 NAPGQ99747 312 aaPredicted RBP11.98□□□□□ -0.49
APTX-227ENST00000485479 HINFPQ9BQA5 517 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 ARRDC1-AS1Q9H2J1 176 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 GLOD4Q9HC38 313 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 PCDH12Q9NPG4 1184 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 RSPH14Q9UHP6 348 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 FZD4Q9ULV1 537 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 ZFR2Q9UPR6 939 aaKnown RBP11.98□□□□□ -0.49
APTX-227ENST00000485479 LRRK1Q38SD2 2015 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 TRPM6Q9BX84 2022 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 DCHS1Q96JQ0 3298 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 HACD1B0YJ81 288 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 WNT9AO14904 365 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 IGHV4-34P06331 123 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 PIRTP0C851 137 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 HSPA9P38646 679 aaKnown RBP11.97□□□□□ -0.49
APTX-227ENST00000485479 SKOR1P84550 965 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 XRCC4Q13426 336 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 BYSLQ13895 437 aaKnown RBP11.97□□□□□ -0.49
APTX-227ENST00000485479 ANKRD20A2Q5SQ80 823 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 ANKRD20A1Q5TYW2 823 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 ANKRD20A3Q5VUR7 823 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 PRELID2Q8N945 189 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 LPCAT1Q8NF37 534 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 PIGKQ92643 395 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 NKD2Q969F2 451 aaPredicted RBP11.97□□□□□ -0.49
APTX-227ENST00000485479 APOL2Q9BQE5 337 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 TDRD1Q9BXT4 1180 aaKnown RBP11.97□□□□□ -0.49
APTX-227ENST00000485479 OSBPL1AQ9BXW6 950 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 CAAP1Q9H8G2 361 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 PIH1D1Q9NWS0 290 aaKnown RBP11.97□□□□□ -0.49
APTX-227ENST00000485479 SCML1Q9UN30 329 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 ZNF148Q9UQR1 794 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.97□□□□□ -0.49
APTX-227ENST00000485479 FADS3Q9Y5Q0 445 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 RALGAPA1Q6GYQ0 2036 aa11.97□□□□□ -0.49
APTX-227ENST00000485479 ADAMTS9Q9P2N4 1935 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 A0A1W2PQU0 124 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 CTAGE9A4FU28 777 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 UPK3BL1B0FP48 263 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 UPK3BL2E5RIL1 263 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 SLC31A1O15431 190 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 MMP20O60882 483 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 RNGTTO60942 597 aaKnown RBP11.96□□□□□ -0.49
APTX-227ENST00000485479 PRLP01236 227 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 LMNAP02545 664 aaKnown RBP11.96□□□□□ -0.49
APTX-227ENST00000485479 SLC4A1P02730 911 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 SERPINF2P08697 491 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 XPAP23025 273 aaPredicted RBP11.96□□□□□ -0.49
APTX-227ENST00000485479 MSNP26038 577 aaKnown RBP11.96□□□□□ -0.49
APTX-227ENST00000485479 OXTRP30559 389 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 CNR2P34972 360 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 CHRNA4P43681 627 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 CSNK1DP48730 415 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 FGL2Q14314 439 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 SPARCL1Q14515 664 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 TRIP13Q15645 432 aaPredicted RBP11.96□□□□□ -0.49
APTX-227ENST00000485479 OASLQ15646 514 aaKnown RBP11.96□□□□□ -0.49
APTX-227ENST00000485479 LYSMD4Q5XG99 296 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 ALG1LQ6GMV1 187 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 TTC27Q6P3X3 843 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 TSPAN33Q86UF1 283 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 ZCCHC9Q8N567 271 aaKnown RBP11.96□□□□□ -0.49
APTX-227ENST00000485479 TTC13Q8NBP0 860 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 FATE1Q969F0 183 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 ECHDC3Q96DC8 303 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 IMP4Q96G21 291 aaKnown RBP11.96□□□□□ -0.49
APTX-227ENST00000485479 LRIG1Q96JA1 1093 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 TUBGCP5Q96RT8 1024 aa11.96□□□□□ -0.49
APTX-227ENST00000485479 HDAC8Q9BY41 377 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms