RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 MTRF1LQ9UGC7 380 aaKnown RBP18.69■□□□□ 0.58
ERCC2-205ENST00000485403 FRYLO94915 3013 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 GOLGA6CA6NDK9 693 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 GOLGA6BA6NDN3 693 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 TP73O15350 636 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 PSMD3O43242 534 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 ANXA9O76027 345 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 GSRP00390 522 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 GOLGA6DP0CG33 693 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 TPSB2P20231 275 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 GEMP55040 296 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 RHOAP61586 193 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 RPS14P62263 151 aaKnown RBP18.68■□□□□ 0.58
ERCC2-205ENST00000485403 NIPAL4Q0D2K0 466 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 TPSAB1Q15661 275 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 ZNF776Q68DI1 518 aaPredicted RBP18.68■□□□□ 0.58
ERCC2-205ENST00000485403 DPY19L3Q6ZPD9 716 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.68■□□□□ 0.58
ERCC2-205ENST00000485403 OR8D1Q8WZ84 308 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 SIPA1Q96FS4 1042 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 IMP4Q96G21 291 aaKnown RBP18.68■□□□□ 0.58
ERCC2-205ENST00000485403 SEMA3CQ99985 751 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 MLPHQ9BV36 600 aaPredicted RBP18.68■□□□□ 0.58
ERCC2-205ENST00000485403 EIF2B3Q9NR50 452 aaKnown RBP18.68■□□□□ 0.58
ERCC2-205ENST00000485403 GOLGA6AQ9NYA3 693 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 USP36Q9P275 1121 aaKnown RBP18.68■□□□□ 0.58
ERCC2-205ENST00000485403 LHX3Q9UBR4 397 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 PPM1HQ9ULR3 514 aa18.68■□□□□ 0.58
ERCC2-205ENST00000485403 ARIH1Q9Y4X5 557 aaPredicted RBP18.68■□□□□ 0.58
ERCC2-205ENST00000485403 RIF1Q5UIP0 2472 aaKnown RBP18.68■□□□□ 0.58
ERCC2-205ENST00000485403 OTOGLQ3ZCN5 2332 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 TTC24A2A3L6 582 aaPredicted RBP18.67■□□□□ 0.58
ERCC2-205ENST00000485403 ERLIN1O75477 346 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 TMEM63AO94886 807 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 IGLV3-19P01714 112 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 CNR2P34972 360 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 MAP7D1Q3KQU3 841 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 CARD16Q5EG05 197 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 PGBD3Q8N328 593 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 PDCD7Q8N8D1 485 aaKnown RBP18.67■□□□□ 0.58
ERCC2-205ENST00000485403 OR2AP1Q8NGE2 309 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 SPATA22Q8NHS9 363 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 ARRDC2Q8TBH0 407 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 VOPP1Q96AW1 172 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 OXNAD1Q96HP4 312 aaPredicted RBP18.67■□□□□ 0.58
ERCC2-205ENST00000485403 RBM15Q96T37 977 aaKnown RBP eCLIP18.67■□□□□ 0.58
ERCC2-205ENST00000485403 FMO2Q99518 471 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 UBP1Q9NZI7 540 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 AAR2Q9Y312 384 aaKnown RBP18.67■□□□□ 0.58
ERCC2-205ENST00000485403 ANKRD36A6QL64 1941 aa18.67■□□□□ 0.58
ERCC2-205ENST00000485403 ERI2A8K979 691 aaKnown RBP18.66■□□□□ 0.58
ERCC2-205ENST00000485403 GOLGA8MH3BSY2 632 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 RNASEH1O60930 286 aaKnown RBP18.66■□□□□ 0.58
ERCC2-205ENST00000485403 ZNF217O75362 1048 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 CES1P23141 567 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 P2RY2P41231 377 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 CD86P42081 329 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 RECQLP46063 649 aaPredicted RBP18.66■□□□□ 0.58
ERCC2-205ENST00000485403 RGRP47804 291 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 CCNHP51946 323 aaPredicted RBP18.66■□□□□ 0.58
ERCC2-205ENST00000485403 SPARCL1Q14515 664 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 CST6Q15828 149 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 MAP9Q49MG5 647 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 ALG1LQ6GMV1 187 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 ZC3H14Q6PJT7 736 aaKnown RBP18.66■□□□□ 0.58
ERCC2-205ENST00000485403 KIAA1324Q6UXG2 1013 aaKnown RBP18.66■□□□□ 0.58
ERCC2-205ENST00000485403 DSG4Q86SJ6 1040 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 MMAAQ8IVH4 418 aaKnown RBP18.66■□□□□ 0.58
ERCC2-205ENST00000485403 CHST14Q8NCH0 376 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 MCUQ8NE86 351 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 EXOC2Q96KP1 924 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 TM6SF2Q9BZW4 377 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 SCUBE2Q9NQ36 999 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 ITM2CQ9NQX7 267 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 ARGLU1Q9NWB6 273 aaPredicted RBP18.66■□□□□ 0.58
ERCC2-205ENST00000485403 FAM153AQ9UHL3 310 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 SCML1Q9UN30 329 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 WASF2Q9Y6W5 498 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 CEP192Q8TEP8 1941 aa18.66■□□□□ 0.58
ERCC2-205ENST00000485403 THADAQ6YHU6 1953 aa18.65■□□□□ 0.58
ERCC2-205ENST00000485403 HRO43593 1189 aa18.65■□□□□ 0.58
ERCC2-205ENST00000485403 AP2A1O95782 977 aa18.65■□□□□ 0.58
ERCC2-205ENST00000485403 MT-CYBP00156 380 aaPredicted RBP18.65■□□□□ 0.58
ERCC2-205ENST00000485403 CTSLP07711 333 aa18.65■□□□□ 0.58
ERCC2-205ENST00000485403 SCNN1BP51168 640 aa18.65■□□□□ 0.58
ERCC2-205ENST00000485403 SNRPD1P62314 119 aaKnown RBP18.65■□□□□ 0.58
ERCC2-205ENST00000485403 SARNPP82979 210 aaKnown RBP18.65■□□□□ 0.58
ERCC2-205ENST00000485403 CDK16Q00536 496 aa18.65■□□□□ 0.58
ERCC2-205ENST00000485403 NSUN2Q08J23 767 aaKnown RBP eCLIP18.65■□□□□ 0.58
ERCC2-205ENST00000485403 MPP3Q13368 585 aa18.65■□□□□ 0.58
ERCC2-205ENST00000485403 USP39Q53GS9 565 aaKnown RBP18.65■□□□□ 0.58
ERCC2-205ENST00000485403 KCTD11Q693B1 232 aa18.65■□□□□ 0.58
ERCC2-205ENST00000485403 PPP1R21Q6ZMI0 780 aa18.65■□□□□ 0.58
ERCC2-205ENST00000485403 PRPF39Q86UA1 669 aaKnown RBP18.65■□□□□ 0.58
ERCC2-205ENST00000485403 CACUL1Q86Y37 369 aa18.65■□□□□ 0.58
ERCC2-205ENST00000485403 KLHDC8BQ8IXV7 354 aa18.65■□□□□ 0.58
ERCC2-205ENST00000485403 ZCCHC9Q8N567 271 aaKnown RBP18.65■□□□□ 0.58
ERCC2-205ENST00000485403 TMIEQ8NEW7 156 aa18.65■□□□□ 0.58
ERCC2-205ENST00000485403 GAB3Q8WWW8 586 aa18.65■□□□□ 0.58
ERCC2-205ENST00000485403 GDAP1L1Q96MZ0 367 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms