RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 FOXP1Q9H334 677 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-210ENST00000482158 MUC13Q9H3R2 512 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 ELOVL5Q9NYP7 299 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 ADAM18Q9Y3Q7 739 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 KCNE2Q9Y6J6 123 aa5.95□□□□□ -1.46
SF3B1-210ENST00000482158 TYW5A2RUC4 315 aaKnown RBP5.94□□□□□ -1.46
SF3B1-210ENST00000482158 PAGE4O60829 102 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 ZC3H11AO75152 810 aaKnown RBP eCLIP5.94□□□□□ -1.46
SF3B1-210ENST00000482158 ATP2C2O75185 946 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 SCGB1D1O95968 90 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 MT-CYBP00156 380 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-210ENST00000482158 SHMT1P34896 483 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 THPOP40225 353 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 GABRB2P47870 512 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 PTGR1Q14914 329 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 SGO1Q5FBB7 561 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 CPLX2Q6PUV4 134 aaKnown RBP5.94□□□□□ -1.46
SF3B1-210ENST00000482158 CYP20A1Q6UW02 462 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 TRILQ7L0X0 811 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 C1QL2Q7Z5L3 287 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 TMEM116Q8NCL8 245 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 TMEM163Q8TC26 289 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 BBS4Q96RK4 519 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 TREX2Q9BQ50 279 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-210ENST00000482158 C1QTNF7Q9BXJ2 289 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 DDX4Q9NQI0 724 aaKnown RBP5.94□□□□□ -1.46
SF3B1-210ENST00000482158 DIAPH3Q9NSV4 1193 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 ABI3Q9P2A4 366 aa5.94□□□□□ -1.46
SF3B1-210ENST00000482158 LSM4Q9Y4Z0 139 aaKnown RBP5.94□□□□□ -1.46
SF3B1-210ENST00000482158 TTC3P53804 2025 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 LRRC53A6NM62 1247 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 IRF1P10914 325 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 PCNAP12004 261 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 HOXB2P14652 356 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 AGAP20933 346 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 BDNFP23560 247 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 CDAP32320 146 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 RARSP54136 660 aaKnown RBP5.93□□□□□ -1.46
SF3B1-210ENST00000482158 P2RX3P56373 397 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 CEBPZQ03701 1054 aaKnown RBP5.93□□□□□ -1.46
SF3B1-210ENST00000482158 FGFBP1Q14512 234 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 MED22Q15528 200 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 CCNG2Q16589 344 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 ZNF284Q2VY69 593 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 WDR78Q5VTH9 848 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 DCAF12L2Q5VW00 463 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 FAM205BPQ63HN1 556 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 HIST2H2BCQ6DN03 193 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 HIST2H2BDQ6DRA6 164 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 ZNF425Q6IV72 752 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 CES5AQ6NT32 575 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 Q6ZSV7 163 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 TRAPPC11Q7Z392 1133 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 TMEM199Q8N511 208 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 SLC35F5Q8WV83 523 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 USP6NLQ92738 828 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 WDFY2Q96P53 400 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 MAP7D2Q96T17 732 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 PRKRIP1Q9H875 184 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-210ENST00000482158 POLR1BQ9H9Y6 1135 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 LIMA1Q9UHB6 759 aaKnown RBP5.93□□□□□ -1.46
SF3B1-210ENST00000482158 FAM96BQ9Y3D0 163 aa5.93□□□□□ -1.46
SF3B1-210ENST00000482158 BECN2A8MW95 431 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 USP17L23D6RBM5 183 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 H0YGN5 161 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 CHL1O00533 1208 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 SOCS2O14508 198 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 SEC14L5O43304 696 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 ZBED4O75132 1171 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 TMEM191BP0C7N4 346 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 ACADMP11310 421 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 ARSBP15848 533 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 TM4SF1P30408 202 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 MLH1P40692 756 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 NR4A2P43354 598 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 PIP4K2AP48426 406 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-210ENST00000482158 COL28A1Q2UY09 1125 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 TTI2Q6NXR4 508 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 ZNF367Q7RTV3 350 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 IRF2BP2Q7Z5L9 587 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 PARP16Q8N5Y8 322 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 C7orf57Q8NEG2 295 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 GTF3C6Q969F1 213 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 ZC3HAV1LQ96H79 300 aaKnown RBP5.92□□□□□ -1.46
SF3B1-210ENST00000482158 APOLD1Q96LR9 279 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 SIN3AQ96ST3 1273 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 SLC6A13Q9NSD5 602 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 PLK2Q9NYY3 685 aa5.92□□□□□ -1.46
SF3B1-210ENST00000482158 FBXO9Q9UK97 447 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-210ENST00000482158 FAM237BA0A1B0GVD1 139 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 FSD2A1L4K1 749 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 LIPT2A6NK58 231 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 RGS11O94810 467 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 CCNDBP1O95273 360 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 LCATP04180 440 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 TFPIP10646 304 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 PSG1P11464 419 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 ETFAP13804 333 aa5.91□□□□□ -1.46
SF3B1-210ENST00000482158 TBXAS1P24557 533 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-210ENST00000482158 ZNF81P51508 661 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms