RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ARL14EPQ8N8R7 260 aaPredicted RBP14.58□□□□□ -0.07
CHD3-211ENST00000481999 MICAL1Q8TDZ2 1067 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 WDR60Q8WVS4 1066 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 FAM167BQ9BTA0 163 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 STN1Q9H668 368 aaKnown RBP14.58□□□□□ -0.07
CHD3-211ENST00000481999 C11orf49Q9H6J7 331 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 CPSF2Q9P2I0 782 aaKnown RBP14.58□□□□□ -0.07
CHD3-211ENST00000481999 STX18Q9P2W9 335 aaKnown RBP14.58□□□□□ -0.07
CHD3-211ENST00000481999 DCDC2Q9UHG0 476 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 CORO1CQ9ULV4 474 aaPredicted RBP14.58□□□□□ -0.07
CHD3-211ENST00000481999 ITM2AO43736 263 aa14.58□□□□□ -0.08
CHD3-211ENST00000481999 ZNF189O75820 626 aaPredicted RBP14.58□□□□□ -0.08
CHD3-211ENST00000481999 ARCN1P48444 511 aaKnown RBP14.58□□□□□ -0.08
CHD3-211ENST00000481999 GEMP55040 296 aa14.58□□□□□ -0.08
CHD3-211ENST00000481999 SESN3P58005 492 aa14.58□□□□□ -0.08
CHD3-211ENST00000481999 RCN2Q14257 317 aa14.58□□□□□ -0.08
CHD3-211ENST00000481999 LBRQ14739 615 aaKnown RBP14.58□□□□□ -0.08
CHD3-211ENST00000481999 PCID2Q5JVF3 399 aa14.58□□□□□ -0.08
CHD3-211ENST00000481999 LINC00523Q86TU6 105 aa14.58□□□□□ -0.08
CHD3-211ENST00000481999 RBM15BQ8NDT2 890 aaKnown RBP14.58□□□□□ -0.08
CHD3-211ENST00000481999 OXCT2Q9BYC2 517 aaPredicted RBP14.58□□□□□ -0.08
CHD3-211ENST00000481999 SMG9Q9H0W8 520 aaKnown RBP14.58□□□□□ -0.08
CHD3-211ENST00000481999 SLC25A51Q9H1U9 297 aa14.58□□□□□ -0.08
CHD3-211ENST00000481999 SUDS3Q9H7L9 328 aaPredicted RBP14.58□□□□□ -0.08
CHD3-211ENST00000481999 NMRK1Q9NWW6 199 aa14.58□□□□□ -0.08
CHD3-211ENST00000481999 TRPM5Q9NZQ8 1165 aa14.58□□□□□ -0.08
CHD3-211ENST00000481999 LTBP2Q14767 1821 aa14.58□□□□□ -0.08
CHD3-211ENST00000481999 ABHD14A-ACY1A0A1B0GW23 586 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 F8W8V4 182 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 PLIN3O60664 434 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 CNPP09543 421 aaKnown RBP14.57□□□□□ -0.08
CHD3-211ENST00000481999 CDC25CP30307 473 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 SLC1A2P43004 574 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 GLRBP48167 497 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 ARSDP51689 593 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 ZRSR2Q15696 482 aaKnown RBP14.57□□□□□ -0.08
CHD3-211ENST00000481999 ANO4Q32M45 955 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 C1orf53Q5VUE5 145 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 PIWIL2Q8TC59 973 aaKnown RBP14.57□□□□□ -0.08
CHD3-211ENST00000481999 SH3RF2Q8TEC5 729 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 CCDC106Q9BWC9 280 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 PLK2Q9NYY3 685 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 SPG21Q9NZD8 308 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 TCAF1Q9Y4C2 921 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 INSL5Q9Y5Q6 135 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 CBX4O00257 560 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 PARNO95453 639 aaKnown RBP14.57□□□□□ -0.08
CHD3-211ENST00000481999 SLC4A1P02730 911 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 ALDH18A1P54886 795 aaKnown RBP14.57□□□□□ -0.08
CHD3-211ENST00000481999 GNA12Q03113 381 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 KDSRQ06136 332 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 THOC5Q13769 683 aaKnown RBP14.57□□□□□ -0.08
CHD3-211ENST00000481999 PCLAFQ15004 111 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 INSCQ1MX18 579 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 SIRPB2Q5JXA9 342 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 C6orf163Q5TEZ5 329 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 ZNF470Q6ECI4 717 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 SLC41A1Q8IVJ1 513 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 C10orf107Q8IVU9 208 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 HS6ST3Q8IZP7 471 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 WFDC5Q8TCV5 224 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 ZFRQ96KR1 1074 aaKnown RBP14.57□□□□□ -0.08
CHD3-211ENST00000481999 FAM161BQ96MY7 647 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 NDNQ99608 321 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 MCMBPQ9BTE3 642 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 KIAA1671Q9BY89 1806 aa14.57□□□□□ -0.08
CHD3-211ENST00000481999 MYOFQ9NZM1 2061 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 A0A096LPK6 155 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 LCHNA4D1U4 455 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 SNAP91O60641 907 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 TBX10O75333 385 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 CIB2O75838 187 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 TM7SF2O76062 418 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 FGF18O76093 207 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 SERPINE1P05121 402 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 LINC00271P0C7V0 271 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 MBL2P11226 248 aaPredicted RBP14.56□□□□□ -0.08
CHD3-211ENST00000481999 FGF3P11487 239 aaPredicted RBP14.56□□□□□ -0.08
CHD3-211ENST00000481999 GRK2P25098 689 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 MSLNQ13421 630 aaPredicted RBP14.56□□□□□ -0.08
CHD3-211ENST00000481999 TRMT5Q32P41 509 aaKnown RBP14.56□□□□□ -0.08
CHD3-211ENST00000481999 GRTP1Q5TC63 336 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 ANO7Q6IWH7 933 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 NET1Q7Z628 596 aaPredicted RBP14.56□□□□□ -0.08
CHD3-211ENST00000481999 ZC3HC1Q86WB0 502 aaKnown RBP14.56□□□□□ -0.08
CHD3-211ENST00000481999 CEP97Q8IW35 865 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 SCUBE1Q8IWY4 988 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 OSBPL1AQ9BXW6 950 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 C1orf21Q9H246 121 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 FAM96AQ9H5X1 160 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 PDFQ9HBH1 243 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 ENTPD7Q9NQZ7 604 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 DNAJC16Q9Y2G8 782 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 ARL5AQ9Y689 179 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 CHD5Q8TDI0 1954 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 TGM5O43548 720 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 PRAMEF11O60813 436 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 C2P06681 752 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 AOC1P19801 751 aa14.56□□□□□ -0.08
CHD3-211ENST00000481999 SLC1A6P48664 564 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms